Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU6-1131P-201ENST00000364955 107 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-756P-201ENST00000383997 107 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 RPS3AP1-201ENST00000413190 320 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC126124.2-201ENST00000413542 321 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC027124.2-201ENST00000428249 105 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC093663.1-201ENST00000497190 394 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP49-201ENST00000516450 115 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 RNA5SP153-201ENST00000516498 76 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 Y_RNA.685-201ENST00000516532 108 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC006064.5-201ENST00000541782 248 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 MIR5006-201ENST00000583027 110 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AC244505.7-201ENST00000599675 272 ntBASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CUEDC1Q9NWM3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 AC069528.2-201ENST00000624849 1991 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 RNU1-14P-201ENST00000362759 152 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 Y_RNA.85-201ENST00000363014 111 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-309P-201ENST00000364573 106 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 SNORA67.2-201ENST00000384300 149 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 SNORA11.2-201ENST00000408318 127 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 EDDM3CP-201ENST00000415977 425 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-437P-201ENST00000459408 95 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 AC090515.1-201ENST00000465295 476 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 RN7SL542P-201ENST00000467147 294 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 SNORA40.13-201ENST00000516379 120 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 MIR4286-201ENST00000580651 93 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 SNORA51-201ENST00000606420 132 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 AL021707.8-201ENST00000609428 183 ntBASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CUEDC1Q9NWM3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 Y_RNA.163-201ENST00000363702 113 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 SNORD46.1-201ENST00000364139 104 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 MIR1302-5-201ENST00000408164 150 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 TVP23BP1-201ENST00000557500 617 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 AC105137.2-201ENST00000569073 466 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 MIR4727-201ENST00000622232 55 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 AC110079.1-202ENST00000635213 138 ntBASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CUEDC1Q9NWM3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 RNU6-49P-201ENST00000384256 107 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 MIR873-201ENST00000401120 77 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 RPL23AP7-203ENST00000449021 469 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 POLR3GP1-201ENST00000594073 261 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AC097639.2-201ENST00000603159 172 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AC107294.3-201ENST00000609211 526 ntBASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CUEDC1Q9NWM3 AL596211.1-201ENST00000569873 2277 ntBASIC4.09□□□□□ -1.76
CUEDC1Q9NWM3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 MIR383-201ENST00000362257 73 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-1113P-201ENST00000384348 107 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 HMGN2P32-201ENST00000444648 269 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 RNU1-45P-201ENST00000517191 141 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms