Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL606923.1-201ENST00000406616 190 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 BX322639.1-202ENST00000423987 2213 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 MTND3P9-201ENST00000429526 346 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AC016717.1-201ENST00000448918 286 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 RPS26P45-201ENST00000471748 340 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 MTND3P7-201ENST00000474435 343 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AC010493.1-201ENST00000513479 292 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.02□□□□□ -2.25
TREX1Q9NSU2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.02□□□□□ -2.25
TREX1Q9NSU2 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AP003465.2-201ENST00000602571 373 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AL354950.2-201ENST00000617939 290 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 AC005562.2-201ENST00000618264 111 ntBASIC1.02□□□□□ -2.25
TREX1Q9NSU2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RNU6-227P-201ENST00000362865 103 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.159-201ENST00000363674 87 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RNA5SP494-201ENST00000410653 129 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 EIF1P1-201ENST00000421436 341 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AL031667.1-201ENST00000440222 725 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC004386.2-201ENST00000441858 148 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RNU7-180P-201ENST00000459240 63 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AL163195.1-201ENST00000496941 348 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 ARL2BPP4-201ENST00000506854 471 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC025465.4-201ENST00000513422 638 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RNU6-948P-201ENST00000516374 107 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 CYP3A52P-201ENST00000563326 91 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 MIR4709-201ENST00000577272 72 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC015688.6-201ENST00000577737 104 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC080078.3-201ENST00000605407 463 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
TREX1Q9NSU2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.01□□□□□ -2.25
TREX1Q9NSU2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1□□□□□ -2.25
TREX1Q9NSU2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1□□□□□ -2.25
TREX1Q9NSU2 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 SNORA4.2-201ENST00000365313 147 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 SNORA29-201ENST00000384183 140 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 MIR549A-201ENST00000385268 96 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 RN7SKP142-201ENST00000411236 328 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1□□□□□ -2.25
TREX1Q9NSU2 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 USP9YP14-201ENST00000430663 563 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1□□□□□ -2.25
TREX1Q9NSU2 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 RNU7-34P-201ENST00000459394 64 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 snoU13.18-201ENST00000459483 104 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 MTCO2P4-201ENST00000517968 247 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1□□□□□ -2.25
TREX1Q9NSU2 AC016727.2-201ENST00000603988 621 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AP000907.4-201ENST00000604143 237 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AP001596.2-201ENST00000608410 312 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AC109347.2-201ENST00000610220 349 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 HULC.1-201ENST00000612720 240 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 MIR338-201ENST00000636369 67 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 AC099654.5-201ENST00000636479 350 ntBASIC1□□□□□ -2.25
TREX1Q9NSU2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TREX1Q9NSU2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
TREX1Q9NSU2 Y_RNA.381-201ENST00000365666 102 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 SNORD37.1-201ENST00000390968 65 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC073415.1-201ENST00000449240 153 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 CCDC34P1-201ENST00000507441 517 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 SNORA14.1-201ENST00000516113 141 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 RNU2-34P-201ENST00000516534 121 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC104576.1-201ENST00000524225 88 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.99□□□□□ -2.25
TREX1Q9NSU2 MIR4760-201ENST00000585040 80 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AL365434.2-201ENST00000607979 234 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC064836.2-201ENST00000609491 462 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 TCL6_2.1-201ENST00000615162 119 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AC006001.4-201ENST00000622243 395 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 AL359697.1-201ENST00000624879 587 ntBASIC0.99□□□□□ -2.25
TREX1Q9NSU2 RNU6-1305P-201ENST00000364353 104 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 RNA5SP259-201ENST00000365541 109 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
TREX1Q9NSU2 HMGN2P34-201ENST00000437647 269 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 U8.21-201ENST00000459536 136 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC114982.1-201ENST00000469402 321 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AL133373.1-201ENST00000497098 94 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 LRRC34P1-201ENST00000542742 915 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC026470.2-201ENST00000561492 181 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 MIR4528-201ENST00000577763 90 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 Z99497.2-201ENST00000603634 310 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC073114.1-201ENST00000612027 490 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC040896.1-201ENST00000613819 479 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
TREX1Q9NSU2 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms