Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ARHGEF4Q9NR80 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
ARHGEF4Q9NR80 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
ARHGEF4Q9NR80 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.16-201ENST00000362421 102 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 SNORD32B-201ENST00000364460 84 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.331-201ENST00000365267 102 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-326P-201ENST00000365480 107 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-1264P-201ENST00000383891 107 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-907P-201ENST00000390924 102 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 AC005042.3-201ENST00000453230 174 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 S100A11P2-201ENST00000467589 312 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 AL049873.1-201ENST00000480540 376 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 MTND1P19-201ENST00000511780 315 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.673-201ENST00000516306 88 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 RNU2-31P-201ENST00000516954 155 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 AC078938.1-201ENST00000620993 318 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 AC068205.3-201ENST00000636385 468 ntBASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF4Q9NR80 SNORD27-201ENST00000363981 72 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 SNORA68.1-201ENST00000364537 132 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-514P-201ENST00000384208 107 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.569-201ENST00000384749 103 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 SNORA12-201ENST00000391162 147 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.597-201ENST00000410463 100 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 RNA5SP475-201ENST00000410568 110 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 ELOCP21-201ENST00000412558 336 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 RPL30P4-201ENST00000429309 333 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 SCARNA24.2-201ENST00000516968 130 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 DEFB131C-201ENST00000528817 165 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 BX284668.6-201ENST00000606899 438 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 AC069294.1-201ENST00000608397 350 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 MIR3674-201ENST00000636576 68 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
ARHGEF4Q9NR80 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 MIR410-201ENST00000362222 80 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.415-201ENST00000384012 112 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 MIR1294-201ENST00000408503 142 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 POLR2KP2-201ENST00000438155 177 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-107P-201ENST00000516643 102 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 RNU1-117P-201ENST00000517041 158 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-586P-201ENST00000517265 104 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 AC022441.3-201ENST00000605737 136 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 U2.14-201ENST00000615943 113 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 IGHVIII-44-202ENST00000636235 289 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
ARHGEF4Q9NR80 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 SNORA25.1-201ENST00000362326 128 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.54-201ENST00000362766 105 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 RNU6-1266P-201ENST00000362794 105 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC004866.1-201ENST00000411748 78 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 HMGB3P17-201ENST00000504195 649 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 RNU5F-4P-201ENST00000516581 114 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 AL590240.4-201ENST00000616908 390 ntBASIC3.29□□□□□ -1.88
ARHGEF4Q9NR80 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 Y_RNA.286-201ENST00000364813 102 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 MIR218-1-201ENST00000384999 110 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 AL603910.2-201ENST00000407268 136 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 COTL1P1-201ENST00000422309 375 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 TOMM22P2-201ENST00000430735 237 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 AC080013.2-201ENST00000460866 323 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 AC022080.3-201ENST00000544433 482 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 EIF4BP1-201ENST00000554881 351 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 LARP7P3-201ENST00000579888 337 ntBASIC3.28□□□□□ -1.88
ARHGEF4Q9NR80 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms