Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 U2.16-201ENST00000613119 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.12-201ENST00000613778 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.9-201ENST00000615427 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.11-201ENST00000616345 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.2-201ENST00000616535 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.3-201ENST00000617785 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.19-201ENST00000618602 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU2-1-201ENST00000618664 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.6-201ENST00000619225 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.5-201ENST00000619465 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.10-201ENST00000620268 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC099654.7-201ENST00000635788 2127 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 MIR613-201ENST00000385248 95 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 SNORA26.3-201ENST00000391119 136 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP475-201ENST00000410568 110 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AC027124.2-201ENST00000428249 105 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 U8.19-201ENST00000459095 133 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP272-201ENST00000516095 111 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 RNU1-117P-201ENST00000517041 158 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 CYP4A27P-201ENST00000567218 190 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH18Q9HCL0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 RNU6-653P-201ENST00000363074 106 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 RNU6-19P-201ENST00000384718 107 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 MIR670-201ENST00000390142 98 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC004866.1-201ENST00000411748 78 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 RPL32P35-201ENST00000415214 394 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC107626.1-201ENST00000471084 183 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AP000867.2-201ENST00000532468 320 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC105137.2-201ENST00000569073 466 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC008739.3-201ENST00000603262 127 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 MIR3674-201ENST00000636576 68 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC134026.1-201ENST00000623249 2239 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 AC022336.2-201ENST00000568966 2538 ntBASIC3.28□□□□□ -1.88
PCDH18Q9HCL0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
PCDH18Q9HCL0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.28□□□□□ -1.89
PCDH18Q9HCL0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AL109809.4-201ENST00000603520 2185 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 MTATP6P29-201ENST00000415057 132 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC009963.1-201ENST00000417265 157 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AL139281.1-201ENST00000422120 335 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 RPL21P129-201ENST00000491732 478 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 MIR1254-2-201ENST00000579553 63 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC011471.1-201ENST00000585766 187 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC091152.3-201ENST00000604227 325 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 AL136164.4-201ENST00000625013 2135 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDH18Q9HCL0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNU6-1272P-201ENST00000362776 107 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNU6-454P-201ENST00000364292 107 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNU4-10P-201ENST00000364383 140 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNA5SP267-201ENST00000364893 126 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNY1P5-201ENST00000383890 115 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 Y_RNA.571-201ENST00000384753 98 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RNU2-54P-201ENST00000410299 190 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RPS26P42-201ENST00000413485 326 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AL451074.5-201ENST00000415894 435 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AC096649.2-201ENST00000416186 393 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 PTGES3P4-201ENST00000426243 356 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
PCDH18Q9HCL0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms