Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 U2.15-201ENST00000611544 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.16-201ENST00000613119 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 uc_338.14-201ENST00000613162 166 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.12-201ENST00000613778 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 AL357075.2-201ENST00000614906 189 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.9-201ENST00000615427 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.11-201ENST00000616345 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.2-201ENST00000616535 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.3-201ENST00000617785 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.19-201ENST00000618602 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 RNU2-1-201ENST00000618664 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.6-201ENST00000619225 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.5-201ENST00000619465 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 U2.10-201ENST00000620268 191 ntBASIC3.26□□□□□ -1.89
VPS11Q9H270 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS11Q9H270 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
VPS11Q9H270 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS11Q9H270 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS11Q9H270 Y_RNA.75-201ENST00000362927 97 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 Y_RNA.230-201ENST00000364348 109 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 Y_RNA.238-201ENST00000364441 102 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 RNU6-312P-201ENST00000364629 107 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 U3.26-201ENST00000391236 204 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS11Q9H270 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS11Q9H270 AL137159.1-201ENST00000452808 512 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS11Q9H270 RPL27AP5-201ENST00000469428 449 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 AC106707.2-201ENST00000484182 374 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS11Q9H270 RNU4-57P-201ENST00000515980 135 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 RNU6-1234P-201ENST00000516877 103 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 DEFB131C-201ENST00000528817 165 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 MIR3145-201ENST00000580727 82 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS11Q9H270 RNU6-91P-201ENST00000607774 107 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 AC241585.2-209ENST00000638217 143 ntBASIC3.25□□□□□ -1.89
VPS11Q9H270 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VPS11Q9H270 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS11Q9H270 Y_RNA.7-201ENST00000362352 102 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RNU4-80P-201ENST00000363200 141 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 SNORD116-14-201ENST00000383894 92 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 SNORD116-17-201ENST00000383929 92 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RNU6-1083P-201ENST00000384022 107 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RNU6-1145P-201ENST00000384246 107 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 SNORD116-15-201ENST00000384445 92 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 SNORD116-20-201ENST00000384529 92 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 SNORD116-19-201ENST00000384729 92 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 MIR153-2-201ENST00000385225 87 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS11Q9H270 WARS2P1-201ENST00000429678 537 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS11Q9H270 UQCRHP3-201ENST00000451503 251 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RPS27AP9-201ENST00000477681 438 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 RNU6-191P-201ENST00000516295 94 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS11Q9H270 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.24□□□□□ -1.89
VPS11Q9H270 MIR5695-201ENST00000579717 85 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 AC090616.3-201ENST00000582184 217 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 AC006001.4-201ENST00000622243 395 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 AL034408.1-202ENST00000636088 415 ntBASIC3.24□□□□□ -1.89
VPS11Q9H270 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS11Q9H270 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS11Q9H270 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS11Q9H270 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VPS11Q9H270 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
VPS11Q9H270 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS11Q9H270 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS11Q9H270 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS11Q9H270 ZNF204P-201ENST00000416749 2397 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS11Q9H270 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS11Q9H270 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 RNU6-487P-201ENST00000365430 104 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 SNORA40-201ENST00000388090 126 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AC012308.1-201ENST00000451232 178 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS11Q9H270 AC005840.1-201ENST00000498412 377 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 PDCD5P2-201ENST00000507570 312 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS11Q9H270 MIR548X2-201ENST00000579776 100 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AL359881.1-201ENST00000602916 267 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS11Q9H270 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 AC005296.1-201ENST00000616145 209 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 SNORA43.4-201ENST00000629559 138 ntBASIC3.23□□□□□ -1.89
VPS11Q9H270 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS11Q9H270 Y_RNA.182-201ENST00000363880 111 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 SNORA68.1-201ENST00000364537 132 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VPS11Q9H270 SNORA29-201ENST00000384183 140 ntBASIC3.22□□□□□ -1.89
VPS11Q9H270 SNORA20-201ENST00000384662 132 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms