Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC112206.4-201ENST00000515142 405 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 RNU6-947P-201ENST00000516264 106 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL021368.1-201ENST00000607490 540 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 AL603839.4-201ENST00000624658 1005 ntBASIC0.37□□□□□ -2.35
TRIM4Q9C037 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.37□□□□□ -2.35
TRIM4Q9C037 RNU6-61P-201ENST00000365528 109 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 SNORA2A-201ENST00000383885 135 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 Y_RNA.549-201ENST00000384657 102 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 MIR1283-1-201ENST00000408494 87 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 RNU2-39P-201ENST00000410604 198 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 RNU2-72P-201ENST00000411175 163 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 TIMM9P3-201ENST00000428659 274 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 GAPDHP17-201ENST00000449858 1001 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.36□□□□□ -2.35
TRIM4Q9C037 AC116347.2-201ENST00000514912 523 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 RNU4-77P-201ENST00000516692 156 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 SCARNA1-201ENST00000517138 166 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.36□□□□□ -2.35
TRIM4Q9C037 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.36□□□□□ -2.35
TRIM4Q9C037 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.36□□□□□ -2.35
TRIM4Q9C037 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 AL390123.1-201ENST00000603216 237 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 FAM157A-202ENST00000615155 405 ntBASIC0.36□□□□□ -2.35
TRIM4Q9C037 Y_RNA.324-201ENST00000365165 102 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 RNU6-1335P-201ENST00000365426 107 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 RNU6-1257P-201ENST00000384625 110 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 RNU6-417P-201ENST00000384712 107 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 SNORD41-201ENST00000386967 70 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 RNA5SP467-201ENST00000391274 118 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 MIR300-201ENST00000401138 83 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 MIR208B-201ENST00000401172 77 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
TRIM4Q9C037 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
TRIM4Q9C037 AL606489.2-201ENST00000433886 234 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC002486.1-201ENST00000435098 391 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC016717.1-201ENST00000448918 286 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AL133217.1-201ENST00000450980 425 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 snoU13.19-201ENST00000459148 104 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 RNU7-21P-201ENST00000459430 62 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 SRRM1P2-201ENST00000464531 1192 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.35□□□□□ -2.35
TRIM4Q9C037 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC117522.1-201ENST00000509821 380 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC024995.1-201ENST00000523014 93 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 ZNF519P3-201ENST00000557158 1032 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 MIR4305-201ENST00000583252 102 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AL356157.2-201ENST00000605122 111 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AL158042.1-201ENST00000605338 460 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC005520.5-201ENST00000613926 164 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 AC019226.2-201ENST00000625973 424 ntBASIC0.35□□□□□ -2.35
TRIM4Q9C037 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
TRIM4Q9C037 Y_RNA.97-201ENST00000363094 102 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RNU4-1-201ENST00000363925 141 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RNU6-641P-201ENST00000384006 107 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 SNORA36A-201ENST00000384221 132 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RNU6-809P-201ENST00000384461 107 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RNU6-45P-201ENST00000384471 107 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 MTCYBP36-201ENST00000404146 440 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 AC007283.2-201ENST00000424739 197 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RPEP5-201ENST00000441137 268 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 AL358794.1-201ENST00000445689 381 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 AC104982.1-201ENST00000478775 574 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 AC016632.1-201ENST00000503994 196 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 RNU6-685P-201ENST00000517088 95 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRIM4Q9C037 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.34□□□□□ -2.36
TRIM4Q9C037 DEFB131C-201ENST00000528817 165 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 MIR4753-201ENST00000585119 83 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 Z99289.3-201ENST00000605586 594 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 AP000484.1-201ENST00000620067 1252 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.34□□□□□ -2.36
TRIM4Q9C037 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
TRIM4Q9C037 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNU6-562P-201ENST00000362731 107 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 U3.8-201ENST00000363675 217 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 Y_RNA.287-201ENST00000364853 94 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNA5SP331-201ENST00000364986 107 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 MIR558-201ENST00000384920 94 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNA5SP323-201ENST00000391094 133 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC137499.1-201ENST00000427602 88 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 MED13P1-201ENST00000428342 171 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 SNAP23P1-201ENST00000433229 246 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RPS24P1-201ENST00000438550 371 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 HMGB1P29-201ENST00000505659 499 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC091874.1-201ENST00000511402 339 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNU6-1146P-201ENST00000516282 102 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNU6-948P-201ENST00000516374 107 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNU6-567P-201ENST00000516746 107 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC109479.2-201ENST00000517842 174 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC023050.3-201ENST00000541142 333 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 BNIP3P40-201ENST00000596017 556 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC012557.2-201ENST00000605919 418 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 AC104458.1-201ENST00000608243 463 ntBASIC0.33□□□□□ -2.36
TRIM4Q9C037 RNU4-76P-201ENST00000364509 141 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 Y_RNA.504-201ENST00000384481 104 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 SNORA75.2-201ENST00000391138 150 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 SNORA75.3-201ENST00000391231 150 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 AL355796.1-201ENST00000406706 323 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms