Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC124303.1-201ENST00000605703 360 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 MIR7843-201ENST00000622274 79 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 SCARNA4-201ENST00000629045 128 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 BX322639.1-202ENST00000423987 2213 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-1305P-201ENST00000364353 104 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-534P-201ENST00000364877 106 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC004866.1-201ENST00000411748 78 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AL358453.1-201ENST00000422522 250 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC099677.2-201ENST00000436385 175 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC016717.1-201ENST00000448918 286 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 HMGN2P23-201ENST00000456759 269 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC114982.1-201ENST00000469402 321 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU2-34P-201ENST00000516534 121 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-273P-201ENST00000516937 96 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-1314P-201ENST00000517139 104 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 MIR3942-201ENST00000585264 109 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC069114.2-201ENST00000604699 304 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC009318.2-201ENST00000610917 651 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC006504.8-201ENST00000621046 635 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
NDUFAF3Q9BU61 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-661P-201ENST00000362409 107 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 RNU1-96P-201ENST00000364163 162 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 RNU4-9P-201ENST00000364951 139 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 MIR32-201ENST00000384965 70 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 SNORD115-47-201ENST00000391226 86 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 AC112492.4-201ENST00000456549 352 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 MIR3662-201ENST00000637030 95 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 MTND5P6-201ENST00000422338 1798 ntBASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NDUFAF3Q9BU61 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 SNORD114-1-201ENST00000362705 72 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.157-201ENST00000363638 102 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNU4-42P-201ENST00000364738 142 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 U8.10-201ENST00000384260 133 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-975P-201ENST00000384296 105 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-296P-201ENST00000384608 107 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RN7SKP32-201ENST00000410167 303 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNA5SP118-201ENST00000410385 109 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 Z82188.1-201ENST00000436709 154 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AC074290.1-201ENST00000448883 135 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 HMGN1P13-201ENST00000505795 138 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-864P-201ENST00000516256 108 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNA5SP384-201ENST00000516615 116 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 RNA5SP54-201ENST00000516951 92 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AC024614.2-201ENST00000577584 372 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 AP003465.2-201ENST00000602571 373 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 MIR3688-2-201ENST00000636963 87 ntBASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.53□□□□□ -2.16
NDUFAF3Q9BU61 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-1013P-201ENST00000384180 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 SNORA67.3-201ENST00000384366 140 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-831P-201ENST00000384548 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-1235P-201ENST00000384559 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-306P-201ENST00000384617 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 MIR520A-201ENST00000384862 85 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 MIR586-201ENST00000385035 97 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 EBAG9P1-201ENST00000418955 543 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 MTND4LP16-201ENST00000440828 295 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 snoU13.30-201ENST00000458951 104 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-498P-201ENST00000459468 107 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 HMGN2P9-201ENST00000476875 229 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 AC027575.1-201ENST00000481064 460 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 AC092989.1-201ENST00000481235 277 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 Y_RNA.655-201ENST00000515919 96 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 RNU6-1198P-201ENST00000516904 67 ntBASIC1.52□□□□□ -2.17
NDUFAF3Q9BU61 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms