Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU6-181P-201ENST00000363225 107 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNU6-282P-201ENST00000365357 103 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNU6-417P-201ENST00000384712 107 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 MIR532-201ENST00000385025 91 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNA5SP323-201ENST00000391094 133 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RPL21P1-201ENST00000399532 476 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 PIGFP2-201ENST00000421400 651 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 CYCSP46-201ENST00000423569 204 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC133104.1-201ENST00000429100 218 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 HMGN2P34-201ENST00000437647 269 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 NFU1P2-201ENST00000448700 469 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNU6-1037P-201ENST00000459571 107 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 SNORD42A-201ENST00000459584 64 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 MTND1P22-201ENST00000510572 951 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNU6-445P-201ENST00000516949 107 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 SNORA70.22-201ENST00000517160 124 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 RNU6-323P-201ENST00000521915 107 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC024995.1-201ENST00000523014 93 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AC136932.1-201ENST00000574771 208 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AP000907.4-201ENST00000604143 237 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK3BQ9BT76 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
UPK3BQ9BT76 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 RNU6-553P-201ENST00000364047 96 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 RPS27P1-201ENST00000450552 247 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 RNU6-612P-201ENST00000516909 102 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AL391840.1-201ENST00000571144 367 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 MIR4742-201ENST00000581069 85 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.67□□□□□ -2.3
UPK3BQ9BT76 BNIP3P39-201ENST00000601077 554 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 Z99497.2-201ENST00000603634 310 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 AC006001.4-201ENST00000622243 395 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
UPK3BQ9BT76 MIR96-201ENST00000362288 78 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 RNU6-227P-201ENST00000362865 103 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 SNORA33-201ENST00000363664 130 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 RNU5A-2P-201ENST00000384337 116 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 RNU6-297P-201ENST00000384636 107 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 MIR549A-201ENST00000385268 96 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 RNU2-9P-201ENST00000410194 145 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 RNA5SP494-201ENST00000410653 129 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC009094.1-201ENST00000564443 426 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AL929325.1-201ENST00000603096 117 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC016727.2-201ENST00000603988 621 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC008536.2-201ENST00000607284 349 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC027449.1-201ENST00000608890 407 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC087683.2-201ENST00000611384 326 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 AC009509.4-201ENST00000619202 509 ntBASIC0.66□□□□□ -2.3
UPK3BQ9BT76 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.66□□□□□ -2.3
UPK3BQ9BT76 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.65□□□□□ -2.3
UPK3BQ9BT76 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.116-201ENST00000363292 103 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.224-201ENST00000364308 111 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNU6-1305P-201ENST00000364353 104 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 SNORD114-22-201ENST00000365423 72 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNA5SP109-201ENST00000391010 116 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNU6-903P-201ENST00000391270 109 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNA5SP467-201ENST00000391274 118 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 CDK8P2-201ENST00000415020 547 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC009237.7-201ENST00000447357 229 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNU7-138P-201ENST00000459479 64 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNU7-57P-201ENST00000459540 60 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RPL39P38-201ENST00000467018 153 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC010493.1-201ENST00000513479 292 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 RNU1-142P-201ENST00000516682 145 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC021506.2-201ENST00000612354 169 ntBASIC0.65□□□□□ -2.31
UPK3BQ9BT76 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK3BQ9BT76 AC068792.1-201ENST00000621354 417 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms