Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU6-25P-201ENST00000383873 107 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-48P-201ENST00000384161 107 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-15P-201ENST00000384534 107 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-29P-201ENST00000384637 107 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 MIR598-201ENST00000384868 97 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNA5SP323-201ENST00000391094 133 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU2-39P-201ENST00000410604 198 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 MTATP6P20-201ENST00000414147 562 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AC244098.3-201ENST00000424803 96 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-1132P-201ENST00000459214 107 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 SNRPGP7-201ENST00000469016 106 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-947P-201ENST00000516264 106 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 RNU6-917P-201ENST00000516294 104 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AC027419.1-201ENST00000522976 328 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AP003327.1-201ENST00000529684 127 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AC146944.4-201ENST00000602697 718 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AL359075.3-201ENST00000613288 217 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AC008250.2-201ENST00000615261 205 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.4
LIMD2Q9BT23 AC010487.4-201ENST00000637027 61 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
LIMD2Q9BT23 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.226-201ENST00000364337 114 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 MIR208B-201ENST00000401172 77 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AL355796.1-201ENST00000406706 323 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AL354692.1-201ENST00000423044 315 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 MTCYBP10-201ENST00000424905 650 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 DAP3P1-201ENST00000441522 278 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 MTCO1P19-201ENST00000443487 500 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 MTCO2P7-201ENST00000446518 666 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC010486.2-201ENST00000505572 483 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 MTND4LP26-201ENST00000518144 282 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AP002001.1-203ENST00000534002 267 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 SUB1P2-201ENST00000556401 297 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC091805.2-201ENST00000603848 235 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 AC013244.3-201ENST00000605614 388 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.08□□□□□ -2.4
LIMD2Q9BT23 SNORA43.4-201ENST00000629559 138 ntBASIC0.08□□□□□ -2.4
LIMD2Q9BT23 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNU6-428P-201ENST00000362942 107 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNA5SP264-201ENST00000363115 107 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNU6-39P-201ENST00000384344 107 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNU6-1105P-201ENST00000384774 107 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNU1-139P-201ENST00000391307 165 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNA5SP504-201ENST00000410676 117 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AL117339.3-201ENST00000418733 162 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 MRPS18CP6-201ENST00000423587 223 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AL596276.1-201ENST00000434465 418 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AL031313.1-201ENST00000448435 256 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC016717.1-201ENST00000448918 286 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 snoU13.25-201ENST00000458945 104 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC079382.1-201ENST00000493346 557 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 RNU6-1069P-201ENST00000516612 133 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC022868.1-201ENST00000517767 391 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AP003716.2-201ENST00000528260 108 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC026470.2-201ENST00000561492 181 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AC131055.1-201ENST00000584626 316 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 AL158042.1-201ENST00000605338 460 ntBASIC0.07□□□□□ -2.4
LIMD2Q9BT23 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.07□□□□□ -2.4
LIMD2Q9BT23 Y_RNA.476-201ENST00000384347 108 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 MIR193B-201ENST00000384907 83 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 MIR586-201ENST00000385035 97 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC090960.1-201ENST00000421072 306 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC245047.3-201ENST00000429428 127 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AL162725.1-201ENST00000435405 301 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
LIMD2Q9BT23 RPS24P1-201ENST00000438550 371 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC011712.1-201ENST00000588959 234 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AP001836.1-201ENST00000604675 523 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 PART1_2.1-201ENST00000612397 250 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AL136317.1-201ENST00000612653 226 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 TCL6_2.1-201ENST00000615162 119 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 RMST_2.1-201ENST00000617263 136 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC005562.2-201ENST00000618264 111 ntBASIC0.06□□□□□ -2.4
LIMD2Q9BT23 AC004808.1-201ENST00000627671 721 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms