Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC243428.1-201ENST00000421099 264 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC244636.1-201ENST00000421152 228 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNU7-14P-201ENST00000459331 62 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 MTND4LP26-201ENST00000518144 282 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 SNORA59B-202ENST00000578183 701 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 MIR4742-201ENST00000581069 85 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC243960.4-201ENST00000600532 288 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AL158827.2-201ENST00000602494 330 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC124303.1-201ENST00000605703 360 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AL022345.1-201ENST00000607292 135 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AC005562.2-201ENST00000618264 111 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 AL691447.3-201ENST00000635020 330 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 RNU6-306P-201ENST00000384617 107 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AL117342.1-201ENST00000404861 406 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AL356432.1-201ENST00000405809 419 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 Y_RNA.619-201ENST00000410951 90 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC139712.2-201ENST00000424302 339 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC099677.2-201ENST00000436385 175 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AL353572.1-201ENST00000442490 417 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 RPL23AP6-201ENST00000446637 472 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 MTCO3P8-201ENST00000453691 755 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 SNORD5.1-201ENST00000458800 75 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 TRBV12-1-201ENST00000479785 344 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 RPS23P5-201ENST00000495419 428 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 MTND5P5-201ENST00000503764 376 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 RNU5F-4P-201ENST00000516581 114 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 RNU6-250P-201ENST00000516958 103 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AP005660.1-201ENST00000522972 293 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC026470.2-201ENST00000561492 181 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 POLR3GP2-201ENST00000588366 668 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC103810.8-201ENST00000607347 118 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC019193.3-201ENST00000609144 554 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AC092794.1-201ENST00000612734 582 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
HDHD3Q9BSH5 AP006437.1-201ENST00000641440 3685 ntBASIC1.34□□□□□ -2.2
HDHD3Q9BSH5 AC027514.1-201ENST00000588561 1603 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 SNORD114-1-201ENST00000362705 72 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNU6-23P-201ENST00000363283 107 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNU6-1059P-201ENST00000363752 98 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNU6-933P-201ENST00000384424 107 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNU6-790P-201ENST00000384479 105 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNA5SP212-201ENST00000391223 107 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 MIR548K-201ENST00000408406 116 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC009161.1-201ENST00000417306 376 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC004386.2-201ENST00000441858 148 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC009237.7-201ENST00000447357 229 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 UBL5P3-201ENST00000475112 231 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RPL30P10-201ENST00000488148 337 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 CBX3P4-201ENST00000538909 354 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC027288.2-201ENST00000553028 243 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 DEFB122-202ENST00000569013 197 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 AC005786.1-201ENST00000588553 154 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
HDHD3Q9BSH5 CBX3P1-201ENST00000325243 554 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 RNU4-9P-201ENST00000364951 139 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 MIR504-201ENST00000385065 83 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 AL627390.1-201ENST00000396055 340 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 AL356776.1-201ENST00000406574 447 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 Z82205.1-201ENST00000428456 297 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 USP9YP30-201ENST00000430729 455 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 AL357134.1-201ENST00000445848 426 ntBASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.32□□□□□ -2.2
HDHD3Q9BSH5 AC007395.1-201ENST00000451333 677 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms