Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 EIF4EP2-201ENST00000422816 654 ntBASIC2□□□□□ -2.09
CDCA3Q99618 MTND4P17-201ENST00000470444 350 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
CDCA3Q99618 KRTAP13-6P-201ENST00000508999 371 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AC026782.1-201ENST00000512952 449 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2□□□□□ -2.09
CDCA3Q99618 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2□□□□□ -2.09
CDCA3Q99618 MIR548S-201ENST00000581352 82 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AC018462.2-201ENST00000605375 395 ntBASIC2□□□□□ -2.09
CDCA3Q99618 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
CDCA3Q99618 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
CDCA3Q99618 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDCA3Q99618 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CDCA3Q99618 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
CDCA3Q99618 Y_RNA.2-201ENST00000362330 96 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-596P-201ENST00000365395 98 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-611P-201ENST00000384276 104 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 Y_RNA.482-201ENST00000384377 111 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-601P-201ENST00000384540 107 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 Y_RNA.533-201ENST00000384596 114 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-1050P-201ENST00000410388 107 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-321P-201ENST00000410912 106 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU2-41P-201ENST00000410991 178 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 Z82188.1-201ENST00000436709 154 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC104435.1-201ENST00000483483 166 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC132942.1-201ENST00000486753 483 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.99□□□□□ -2.09
CDCA3Q99618 Y_RNA.670-201ENST00000516255 105 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 RNU6-1016P-201ENST00000516689 94 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.99□□□□□ -2.09
CDCA3Q99618 AC233702.2-202ENST00000562547 291 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC090517.1-201ENST00000569307 266 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.99□□□□□ -2.09
CDCA3Q99618 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 UBE2V2P2-201ENST00000587677 504 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC009994.1-201ENST00000606889 253 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AC084768.2-201ENST00000622736 221 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
CDCA3Q99618 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDCA3Q99618 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.99□□□□□ -2.09
CDCA3Q99618 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDCA3Q99618 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDCA3Q99618 Y_RNA.142-201ENST00000363491 102 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 RNY3P14-201ENST00000384309 102 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 MIR549A-201ENST00000385268 96 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 Y_RNA.594-201ENST00000410373 140 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 RNU4-14P-201ENST00000410858 122 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 BTF3P4-201ENST00000418852 495 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.98□□□□□ -2.09
CDCA3Q99618 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.98□□□□□ -2.09
CDCA3Q99618 AC091951.2-201ENST00000500762 203 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 Y_RNA.691-201ENST00000516611 103 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.98□□□□□ -2.09
CDCA3Q99618 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.98□□□□□ -2.09
CDCA3Q99618 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.98□□□□□ -2.09
CDCA3Q99618 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 MIR5696-201ENST00000578474 85 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 AC010928.2-201ENST00000588017 287 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 AP000654.2-201ENST00000605633 586 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.98□□□□□ -2.09
CDCA3Q99618 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.98□□□□□ -2.09
CDCA3Q99618 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDCA3Q99618 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDCA3Q99618 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDCA3Q99618 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDCA3Q99618 RNU6-593P-201ENST00000364716 112 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 RNU6-234P-201ENST00000365229 104 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 U8.10-201ENST00000384260 133 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 MIR32-201ENST00000384965 70 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 MIR487A-201ENST00000385009 80 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDCA3Q99618 AL358453.1-201ENST00000422522 250 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 OR2AQ1P-201ENST00000451972 200 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 AL137159.1-201ENST00000452808 512 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.97□□□□□ -2.09
CDCA3Q99618 PRELID3BP1-201ENST00000457142 540 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.97□□□□□ -2.09
CDCA3Q99618 AC026271.5-201ENST00000577873 130 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 SNRPGP17-201ENST00000603780 214 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 AC009229.3-201ENST00000608056 282 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.97□□□□□ -2.09
CDCA3Q99618 AC099654.5-201ENST00000636479 350 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 MTND4P12-201ENST00000498999 1377 ntBASIC1.97□□□□□ -2.09
CDCA3Q99618 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDCA3Q99618 SNORD115-3-201ENST00000363100 82 ntBASIC1.96□□□□□ -2.1
CDCA3Q99618 RNU4-9P-201ENST00000364951 139 ntBASIC1.96□□□□□ -2.1
CDCA3Q99618 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
CDCA3Q99618 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
CDCA3Q99618 AC092473.1-201ENST00000441098 221 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms