Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC010154.1-201ENST00000425857 269 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.8□□□□□ -2.28
VAT1Q99536 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.8□□□□□ -2.28
VAT1Q99536 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.8□□□□□ -2.28
VAT1Q99536 AL606517.2-201ENST00000442855 241 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.8□□□□□ -2.28
VAT1Q99536 NFU1P2-201ENST00000448700 469 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 SNORD42A-201ENST00000459584 64 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 RPL39P38-201ENST00000467018 153 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.8□□□□□ -2.28
VAT1Q99536 RNU6-1146P-201ENST00000516282 102 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 RNU6-1069P-201ENST00000516612 133 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 RNU6-445P-201ENST00000516949 107 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.8□□□□□ -2.28
VAT1Q99536 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AP001596.2-201ENST00000608410 312 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AC006001.4-201ENST00000622243 395 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 AC079248.2-201ENST00000623779 326 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.8□□□□□ -2.28
VAT1Q99536 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VAT1Q99536 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU6-1031P-201ENST00000384773 107 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 SNORD73A-201ENST00000386062 65 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU6-903P-201ENST00000391270 109 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU2-9P-201ENST00000410194 145 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC004866.1-201ENST00000411748 78 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.79□□□□□ -2.28
VAT1Q99536 AC133104.1-201ENST00000429100 218 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.79□□□□□ -2.28
VAT1Q99536 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.79□□□□□ -2.28
VAT1Q99536 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.79□□□□□ -2.28
VAT1Q99536 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 SNRPFP3-201ENST00000457792 225 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RPS29P27-201ENST00000463711 170 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.79□□□□□ -2.28
VAT1Q99536 SNORA31.10-201ENST00000516482 106 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU6-759P-201ENST00000516740 103 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU6-612P-201ENST00000516909 102 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 RNU6-232P-201ENST00000517144 64 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 SNORA70.22-201ENST00000517160 124 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC024995.1-201ENST00000523014 93 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.79□□□□□ -2.28
VAT1Q99536 AP002963.1-201ENST00000530590 184 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AL137161.1-201ENST00000532231 390 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC026470.2-201ENST00000561492 181 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC009094.1-201ENST00000564443 426 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.79□□□□□ -2.28
VAT1Q99536 MIR5583-1-201ENST00000580941 59 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC008088.1-201ENST00000580993 280 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 Z99497.2-201ENST00000603634 310 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 AL359697.1-201ENST00000624879 587 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
VAT1Q99536 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VAT1Q99536 RNU5B-2P-201ENST00000363036 113 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 RNU6-248P-201ENST00000410720 107 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC013410.2-201ENST00000422627 201 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.78□□□□□ -2.28
VAT1Q99536 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 CETN4P-201ENST00000432407 469 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.78□□□□□ -2.28
VAT1Q99536 MTCO3P8-201ENST00000453691 755 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.78□□□□□ -2.28
VAT1Q99536 RN7SKP265-201ENST00000516448 223 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VAT1Q99536 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.78□□□□□ -2.28
VAT1Q99536 AC234772.3-201ENST00000602277 528 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC025449.1-201ENST00000603896 529 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AP000907.4-201ENST00000604143 237 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AL136370.1-201ENST00000608166 691 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 U2.17-201ENST00000611454 95 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC122133.1-201ENST00000613964 233 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AF246928.1-201ENST00000623768 87 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 AC068787.1-201ENST00000623908 691 ntBASIC0.78□□□□□ -2.28
VAT1Q99536 RNU6-227P-201ENST00000362865 103 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 RNU6-1106P-201ENST00000390845 107 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 RNA5SP323-201ENST00000391094 133 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 MIR1253-201ENST00000408273 105 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 RPS26P42-201ENST00000413485 326 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 PIGFP2-201ENST00000421400 651 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 RAB28P5-201ENST00000427490 651 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 TIMM9P3-201ENST00000428659 274 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 AC009237.7-201ENST00000447357 229 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
VAT1Q99536 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.77□□□□□ -2.29
VAT1Q99536 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.77□□□□□ -2.29
VAT1Q99536 AC008015.1-201ENST00000555505 465 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms