Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-873P-201ENST00000363833 107 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU4-84P-201ENST00000364200 139 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA71.1-201ENST00000364523 117 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-741P-201ENST00000383889 107 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORD116-20-201ENST00000384529 92 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 U3.37-201ENST00000408528 213 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RN7SKP220-201ENST00000410611 288 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 RNA5SP341-201ENST00000516261 117 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA70.16-201ENST00000516390 95 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AP002001.1-203ENST00000534002 267 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AC233702.2-202ENST00000562547 291 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR5692C2-201ENST00000577959 77 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AC022441.3-201ENST00000605737 136 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 SCARNA4-202ENST00000625402 129 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR3658-201ENST00000636291 56 ntBASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK5RAP1Q96SZ6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 RNA5SP205-201ENST00000364653 136 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-1199P-201ENST00000411249 104 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 SNRPEP9-201ENST00000436794 238 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 S100A11P2-201ENST00000467589 312 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA25.12-201ENST00000516202 82 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AP005660.1-201ENST00000522972 293 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR6076-201ENST00000617521 113 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.778-201ENST00000620203 90 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 AC091932.3-201ENST00000624223 323 ntBASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK5RAP1Q96SZ6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.21□□□□□ -1.89
CDK5RAP1Q96SZ6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.89
CDK5RAP1Q96SZ6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.7-201ENST00000362352 102 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.230-201ENST00000364348 109 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU4-10P-201ENST00000364383 140 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 Z92545.1-201ENST00000411782 234 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 MTND4LP9-201ENST00000427694 174 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC005042.3-201ENST00000453230 174 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1333P-201ENST00000516162 93 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC107016.2-201ENST00000547968 190 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC024153.1-201ENST00000603103 365 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC004467.1-201ENST00000615678 330 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC000403.1-201ENST00000613696 3585 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 AC010332.2-201ENST00000613083 1904 ntBASIC3.21□□□□□ -1.9
CDK5RAP1Q96SZ6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1272P-201ENST00000362776 107 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.71-201ENST00000362892 104 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-153P-201ENST00000364422 104 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR544A-201ENST00000384855 91 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 U8.19-201ENST00000459095 133 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 RPS27AP9-201ENST00000477681 438 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC010409.1-201ENST00000487382 476 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AP004607.1-201ENST00000524456 203 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 HSPE1P4-201ENST00000550617 308 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC027309.3-201ENST00000623419 351 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 AC092593.1-201ENST00000515413 1815 ntBASIC3.2□□□□□ -1.9
CDK5RAP1Q96SZ6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 FTLP6-201ENST00000355274 422 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA72.2-201ENST00000365028 127 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.572-201ENST00000384757 98 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR888-201ENST00000401186 77 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 RPL23AP95-201ENST00000426806 265 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 AC008267.6-201ENST00000441664 139 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms