Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 snoU13.6-201ENST00000458785 104 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 RNU6-120P-201ENST00000516077 103 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 MIR5701-3-201ENST00000578890 82 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 MIR5701-1-201ENST00000585138 82 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 MIR5701-2-201ENST00000615634 82 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AC126177.8-201ENST00000618339 1015 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 SCARNA4-201ENST00000629045 128 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 RNA5SP125-201ENST00000364843 120 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.419-201ENST00000384041 102 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 MTCO2P27-201ENST00000420740 428 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AC087477.1-201ENST00000465747 340 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AC005899.2-201ENST00000584353 90 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AL133255.1-201ENST00000606374 441 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 AL359314.1-201ENST00000616913 261 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 MIR7843-201ENST00000622274 79 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 MTND4P29-201ENST00000503122 1372 ntBASIC2.47□□□□□ -2.01
SIN3AQ96ST3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SIN3AQ96ST3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 MIR95-201ENST00000385072 81 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 MTCYBP2-201ENST00000407745 171 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 RNA5SP494-201ENST00000410653 129 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AL353997.1-201ENST00000432936 108 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AC090096.1-201ENST00000489168 390 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AC145146.1-201ENST00000496370 254 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 HMGB3P3-201ENST00000510526 400 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 CYP4A27P-201ENST00000567218 190 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 MIR3124-201ENST00000582636 67 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AC090517.3-201ENST00000625170 141 ntBASIC2.46□□□□□ -2.02
SIN3AQ96ST3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
SIN3AQ96ST3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIN3AQ96ST3 RNU6-944P-201ENST00000364023 107 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 RNU4-9P-201ENST00000364951 139 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 U8.10-201ENST00000384260 133 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 RNU6-378P-201ENST00000384324 107 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.579-201ENST00000390939 94 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 MTCO3P29-201ENST00000432119 779 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
SIN3AQ96ST3 RPL30P10-201ENST00000488148 337 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AC093303.1-201ENST00000514549 295 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 RNU6-567P-201ENST00000516746 107 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.45□□□□□ -2.02
SIN3AQ96ST3 CBX3P4-201ENST00000538909 354 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 MIR3923-201ENST00000579521 83 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AL670379.2-201ENST00000604983 252 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AL138963.2-201ENST00000605137 226 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 AC005520.5-201ENST00000613926 164 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 MIR6715A-201ENST00000615929 79 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 MIR5739-201ENST00000619803 80 ntBASIC2.45□□□□□ -2.02
SIN3AQ96ST3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RNY1P16-201ENST00000363063 111 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.187-201ENST00000363918 113 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RNU4-56P-201ENST00000364700 142 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 Y_RNA.394-201ENST00000383942 103 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 MIR487A-201ENST00000385009 80 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 MIR29B2-201ENST00000385055 81 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 MIR559-201ENST00000385188 96 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RPS26P42-201ENST00000413485 326 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RPL23AP42-201ENST00000471152 471 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 AC022493.2-201ENST00000506122 481 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RNU6-307P-201ENST00000516743 106 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 RNU6-586P-201ENST00000517265 104 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 AC023824.2-201ENST00000566185 400 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SIN3AQ96ST3 AC025754.2-201ENST00000606491 432 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
SIN3AQ96ST3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SIN3AQ96ST3 SNORA17.3-201ENST00000391159 129 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 SNORA12-201ENST00000391162 147 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AL161788.1-201ENST00000441805 169 ntBASIC2.43□□□□□ -2.02
SIN3AQ96ST3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.43□□□□□ -2.02
SIN3AQ96ST3 RN7SKP210-201ENST00000459176 261 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms