Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.7□□□□□ -1.98
SNX18Q96RF0 AC006386.2-201ENST00000624491 75 ntBASIC2.7□□□□□ -1.98
SNX18Q96RF0 AC012005.1-201ENST00000624575 75 ntBASIC2.7□□□□□ -1.98
SNX18Q96RF0 MIR7515-201ENST00000637837 67 ntBASIC2.7□□□□□ -1.98
SNX18Q96RF0 AC099654.7-201ENST00000635788 2127 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNX18Q96RF0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 SNORD113-8-201ENST00000363497 74 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 EIF4EP4-201ENST00000424916 578 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC007215.1-201ENST00000464893 276 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 RPL39P38-201ENST00000467018 153 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC103975.1-201ENST00000482506 483 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 MTND1P19-201ENST00000511780 315 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC012433.1-201ENST00000588916 398 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC010999.1-201ENST00000611856 324 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AC005520.5-201ENST00000613926 164 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 AL357075.2-201ENST00000614906 189 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.69□□□□□ -1.98
SNX18Q96RF0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX18Q96RF0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNX18Q96RF0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNX18Q96RF0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 Y_RNA.60-201ENST00000362831 98 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 RNU6-486P-201ENST00000363116 107 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC005002.2-201ENST00000438228 269 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 RPS3P1-201ENST00000456781 192 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.68□□□□□ -1.98
SNX18Q96RF0 RPL26P26-201ENST00000480251 434 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC145146.1-201ENST00000496370 254 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 SEM1P1-201ENST00000506694 209 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 SNORA40.9-201ENST00000515895 93 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX18Q96RF0 DEFB108E-201ENST00000524692 240 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC107016.2-201ENST00000547968 190 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 UBL5P2-201ENST00000583788 219 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 RPL30P11-203ENST00000598995 310 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AL670379.2-201ENST00000604983 252 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC078938.1-201ENST00000620993 318 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SNX18Q96RF0 BX322639.1-202ENST00000423987 2213 ntBASIC2.68□□□□□ -1.98
SNX18Q96RF0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNX18Q96RF0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX18Q96RF0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNX18Q96RF0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNX18Q96RF0 MIR22-201ENST00000362190 85 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 RNU6-961P-201ENST00000363893 105 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 RNU6-102P-201ENST00000384485 104 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 SNORD67-201ENST00000390833 111 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 RNA5SP201-201ENST00000410316 124 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 MTND4LP30-201ENST00000454092 297 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC073901.1-201ENST00000462471 408 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC140059.1-201ENST00000489238 361 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC107222.1-201ENST00000510899 637 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 Y_RNA.673-201ENST00000516306 88 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 RRN3P3-201ENST00000549207 578 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 EIF4BP1-201ENST00000554881 351 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 MZT1P2-201ENST00000604387 248 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
SNX18Q96RF0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX18Q96RF0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNX18Q96RF0 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.66□□□□□ -1.98
SNX18Q96RF0 MTND5P35-201ENST00000557537 1720 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 AL391987.6-201ENST00000305671 199 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU6-626P-201ENST00000363354 107 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU6-727P-201ENST00000363592 107 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU6-20P-201ENST00000384106 107 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU4-30P-201ENST00000410245 143 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RN7SKP220-201ENST00000410611 288 ntBASIC2.66□□□□□ -1.98
SNX18Q96RF0 RNU6-847P-201ENST00000411115 108 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms