Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.215-201ENST00000364204 112 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-312P-201ENST00000364629 107 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-622P-201ENST00000384272 103 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 snoU13.28-201ENST00000459235 104 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 RPS4XP13-201ENST00000483219 789 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 SNORD116-25-201ENST00000516517 92 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 MIR3690-201ENST00000580266 75 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 MIR4435-1-201ENST00000582552 80 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 AC002543.1-201ENST00000299783 1954 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNGAP1Q96PV0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SYNGAP1Q96PV0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SYNGAP1Q96PV0 PWAR6-201ENST00000552334 4618 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-270P-201ENST00000364131 105 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 Y_RNA.568-201ENST00000384742 113 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 MIR184-201ENST00000384962 84 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 SNORA26.3-201ENST00000391119 136 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 CBX3P9-201ENST00000402326 552 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AC096649.2-201ENST00000416186 393 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 U8.19-201ENST00000459095 133 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AC007215.1-201ENST00000464893 276 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-426P-201ENST00000516464 97 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 RNU1-117P-201ENST00000517041 158 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AP002001.1-203ENST00000534002 267 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 MIR3136-201ENST00000583498 78 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 RMST_8.1-201ENST00000610287 165 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 AC100821.1-201ENST00000523153 2479 ntBASIC3.83□□□□□ -1.8
SYNGAP1Q96PV0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 RNU1-62P-201ENST00000362599 164 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 Y_RNA.293-201ENST00000364908 93 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-763P-201ENST00000390865 106 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 MIR887-201ENST00000401258 79 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-735P-201ENST00000410612 107 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 RNA5SP341-201ENST00000516261 117 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 SUMO2P18-201ENST00000518873 252 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 TGIF1P1-201ENST00000558095 802 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 MIR3684-201ENST00000579779 74 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC093732.2-201ENST00000607950 274 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC022149.2-201ENST00000621061 203 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 AC018692.3-201ENST00000623929 123 ntBASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNGAP1Q96PV0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 SNORA31-201ENST00000362607 130 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-818P-201ENST00000364837 108 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-19P-201ENST00000384718 107 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 U3.40-201ENST00000408706 208 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 AL603825.1-201ENST00000438481 80 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 AL049830.2-201ENST00000480072 201 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 RNU6-479P-201ENST00000516348 105 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 AL365222.1-201ENST00000614661 98 ntBASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNGAP1Q96PV0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 Y_RNA.23-201ENST00000362496 106 ntBASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 RNU4-84P-201ENST00000364200 139 ntBASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 SNORD87-201ENST00000364849 89 ntBASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 SNORA22C-201ENST00000384614 134 ntBASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 AC027124.2-201ENST00000428249 105 ntBASIC3.8□□□□□ -1.8
SYNGAP1Q96PV0 CR769767.1-201ENST00000436337 346 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms