Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 SNORA11.1-201ENST00000408133 129 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 RNA5SP129-201ENST00000410276 118 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 MLLT10P1-201ENST00000418346 262 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 RPL26P9-201ENST00000457466 433 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 RNU6-928P-201ENST00000516876 104 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 MIR5688-201ENST00000580619 83 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 AL356575.1-201ENST00000603008 283 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 U6.105-201ENST00000637379 88 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 ADAM3A-203ENST00000461344 2157 ntBASIC4.24□□□□□ -1.73
TRERF1Q96PN7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.24□□□□□ -1.73
TRERF1Q96PN7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRERF1Q96PN7 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 SNORD45.3-201ENST00000363836 72 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 RNU6-884P-201ENST00000363889 107 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 SNORD58C-201ENST00000365223 64 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 RNU6-597P-201ENST00000365620 102 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 Y_RNA.456-201ENST00000384232 111 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 U3.26-201ENST00000391236 204 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AL159169.1-201ENST00000421119 127 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC099548.1-201ENST00000421443 426 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC005921.1-201ENST00000510589 286 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 RNU6-581P-201ENST00000516214 105 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 Y_RNA.692-201ENST00000516627 105 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC008011.1-201ENST00000545989 227 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 MIR3690-201ENST00000580266 75 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC004832.5-201ENST00000608677 401 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.23□□□□□ -1.73
TRERF1Q96PN7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC022336.2-201ENST00000568966 2538 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 AC068647.1-201ENST00000489539 2265 ntBASIC4.23□□□□□ -1.73
TRERF1Q96PN7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 SNORD9-201ENST00000362566 104 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 U8.6-201ENST00000364939 135 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 MIR548A1-201ENST00000385041 97 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 RNA5SP239-201ENST00000410218 129 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 RNA5SP504-201ENST00000410676 117 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 RNY4P29-201ENST00000410801 97 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 SNORD105B-201ENST00000458770 79 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 RNU6-781P-201ENST00000516377 101 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 AC007179.3-201ENST00000604976 235 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 AL121890.5-201ENST00000620848 304 ntBASIC4.22□□□□□ -1.73
TRERF1Q96PN7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.22□□□□□ -1.73
TRERF1Q96PN7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRERF1Q96PN7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.21□□□□□ -1.73
TRERF1Q96PN7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.21□□□□□ -1.73
TRERF1Q96PN7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 RNU6-508P-201ENST00000363231 103 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 RNU6-217P-201ENST00000384164 104 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 RNU6-905P-201ENST00000384434 107 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 MIR34B-201ENST00000385076 84 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AC006028.1-201ENST00000438379 402 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 TRBV12-2-201ENST00000489763 344 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 CYP4A27P-201ENST00000567218 190 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AC009163.5-201ENST00000575421 637 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 SNRPGP20-201ENST00000604477 205 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AC099778.2-201ENST00000610904 211 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 SNORD98-201ENST00000636377 67 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AP000553.6-201ENST00000641242 118 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AC138915.1-201ENST00000565427 1685 ntBASIC4.21□□□□□ -1.74
TRERF1Q96PN7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRERF1Q96PN7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 MIR184-201ENST00000384962 84 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 HMGN2P30-201ENST00000423237 256 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 CYCSP35-201ENST00000451978 304 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 SNRPGP8-201ENST00000454064 226 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.2□□□□□ -1.74
TRERF1Q96PN7 RPS4XP2-201ENST00000458402 793 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 RPL30P5-201ENST00000494923 336 ntBASIC4.2□□□□□ -1.74
TRERF1Q96PN7 RNU2-60P-201ENST00000517290 128 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms