Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-685P-201ENST00000517088 95 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AP003716.2-201ENST00000528260 108 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC023050.3-201ENST00000541142 333 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.01□□□□□ -2.41
AP1S3Q96PC3 MIR4298-201ENST00000584380 73 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AL158042.1-201ENST00000605338 460 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 AC122133.1-201ENST00000613964 233 ntBASIC0.01□□□□□ -2.41
AP1S3Q96PC3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.01□□□□□ -2.41
AP1S3Q96PC3 Y_RNA.22-201ENST00000362492 102 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 SNORA2.2-201ENST00000365473 135 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 RNU6-1067P-201ENST00000384752 107 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 RNU6-177P-201ENST00000411257 104 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 RPS3AP3-201ENST00000411933 242 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 CDK8P2-201ENST00000415020 547 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 MTND3P17-201ENST00000416968 344 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AC090960.1-201ENST00000421072 306 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AC012306.1-201ENST00000423267 114 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 TAF9P1-201ENST00000445421 515 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 TAF9P2-201ENST00000454958 515 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AC022364.2-201ENST00000457963 554 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 snoU13.6-201ENST00000458785 104 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 OR9P1P-201ENST00000496431 281 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AC016632.1-201ENST00000503994 196 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 RNU6-1146P-201ENST00000516282 102 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0□□□□□ -2.41
AP1S3Q96PC3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0□□□□□ -2.41
AP1S3Q96PC3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0□□□□□ -2.41
AP1S3Q96PC3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0□□□□□ -2.41
AP1S3Q96PC3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0□□□□□ -2.41
AP1S3Q96PC3 AC146944.4-201ENST00000602697 718 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AL357312.1-201ENST00000603879 298 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AC064807.4-201ENST00000607201 407 ntBASIC0□□□□□ -2.41
AP1S3Q96PC3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0□□□□□ -2.41
AP1S3Q96PC3 SNORA63.3-201ENST00000362682 132 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 RNU6-45P-201ENST00000384471 107 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 RNA5SP219-201ENST00000390940 113 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 U8.16-201ENST00000391279 133 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 RNA5SP193-201ENST00000410353 107 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 RNU6-57P-201ENST00000411348 103 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AL117339.3-201ENST00000418733 162 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC004386.2-201ENST00000441858 148 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 USP9YP29-201ENST00000445112 563 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 SNRPGP12-201ENST00000449481 213 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC112206.4-201ENST00000515142 405 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC022868.1-201ENST00000517767 391 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC103996.1-201ENST00000555468 102 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC121334.2-201ENST00000605387 271 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AC008250.2-201ENST00000615261 205 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 AL078595.3-201ENST00000623815 1166 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 MIR924-201ENST00000638017 53 ntBASIC-0.01□□□□□ -2.41
AP1S3Q96PC3 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 MIR1253-201ENST00000408273 105 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 MIR1185-1-201ENST00000408598 86 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AL356583.2-201ENST00000426536 280 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 MTCO1P19-201ENST00000443487 500 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 STAG3L5P-204ENST00000443759 179 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 LINC01399-202ENST00000458450 244 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 MTND1P22-201ENST00000510572 951 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC025647.1-201ENST00000517879 253 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC087854.1-201ENST00000519706 414 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AL391840.1-201ENST00000571144 367 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC004223.2-201ENST00000590309 544 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC234772.3-201ENST00000602277 528 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AL359075.3-201ENST00000613288 217 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 SEPT14P17-201ENST00000617978 177 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 AC019226.2-201ENST00000625973 424 ntBASIC-0.02□□□□□ -2.41
AP1S3Q96PC3 RNU6-424P-201ENST00000384367 105 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 MIR558-201ENST00000384920 94 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RNA5SP511-201ENST00000410487 115 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RNU2-39P-201ENST00000410604 198 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RNA5SP504-201ENST00000410676 117 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AL354692.1-201ENST00000423044 315 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RPL31P35-201ENST00000431058 377 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RNU7-57P-201ENST00000459540 60 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 HSPE1P23-201ENST00000509838 286 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AC036111.3-201ENST00000526389 112 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AL117336.2-201ENST00000602435 335 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AC080013.3-201ENST00000606839 578 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 AL031775.1-201ENST00000607014 887 ntBASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.03□□□□□ -2.41
AP1S3Q96PC3 RNY4P24-201ENST00000362735 96 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 SNORA25.3-201ENST00000363205 127 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms