Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC125232.2-201ENST00000592457 143 ntBASIC-1.01□□□□□ -2.57
CFAP54Q96N23 MIR135A2-201ENST00000384854 100 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 SNORD83.1-201ENST00000411362 77 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC007969.2-201ENST00000441891 191 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 MIR3169-201ENST00000578032 83 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC073968.1-201ENST00000618594 637 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC009269.6-201ENST00000621778 588 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RNU6-374P-201ENST00000364146 108 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 STAG3L5P-204ENST00000443759 179 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RNU6-180P-201ENST00000516697 61 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC095057.3-201ENST00000567102 1157 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AP000942.4-201ENST00000604811 241 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC006213.4-201ENST00000616184 634 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RNU6-312P-201ENST00000364629 107 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 SNORA18.4-201ENST00000516440 124 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RN7SKP256-201ENST00000517201 314 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.02□□□□□ -2.57
CFAP54Q96N23 FGF7P1-201ENST00000582820 288 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AL161729.4-201ENST00000604650 476 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 AL109620.1-201ENST00000618738 1197 ntBASIC-1.02□□□□□ -2.57
CFAP54Q96N23 RNU6-57P-201ENST00000411348 103 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 AC010493.1-201ENST00000513479 292 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 AC244250.2-201ENST00000418731 148 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 USP9YP11-201ENST00000427537 717 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 AL500527.2-201ENST00000454105 95 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 snoU13.30-201ENST00000458951 104 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 MTCO3P9-201ENST00000506989 781 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 RNU6-504P-201ENST00000516568 104 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 BNIP3P6-201ENST00000549284 499 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 MIR378D2-201ENST00000580636 98 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 AC006380.1-201ENST00000603598 186 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 AL356596.1-201ENST00000624230 379 ntBASIC-1.03□□□□□ -2.57
CFAP54Q96N23 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 SNORA4.2-201ENST00000365313 147 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AL590383.1-201ENST00000428602 75 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.04□□□□□ -2.58
CFAP54Q96N23 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
CFAP54Q96N23 SNORD114-6-201ENST00000364393 72 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 RNU6-741P-201ENST00000383889 107 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 MIR653-201ENST00000385279 96 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 RNA5SP33-201ENST00000516687 98 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AC009237.7-201ENST00000447357 229 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 RNU6-1095P-201ENST00000516148 108 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AC105081.1-201ENST00000617727 106 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 AC090772.4-201ENST00000623599 362 ntBASIC-1.04□□□□□ -2.58
CFAP54Q96N23 SNORA72.1-201ENST00000363485 129 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 SCARNA18B-201ENST00000458806 135 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.05□□□□□ -2.58
CFAP54Q96N23 MIR3139-201ENST00000579145 76 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AL391903.3-201ENST00000612158 163 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 RNU5A-1-201ENST00000362698 116 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 RNU6-1176P-201ENST00000390955 107 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AL392003.1-201ENST00000434394 243 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AL163973.1-201ENST00000484753 577 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AC024589.1-201ENST00000512207 263 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AC021146.6-201ENST00000514659 117 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AC079598.5-201ENST00000547460 117 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 RBM11P1-201ENST00000604951 799 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 AC112204.3-201ENST00000623822 332 ntBASIC-1.05□□□□□ -2.58
CFAP54Q96N23 RNU6-944P-201ENST00000364023 107 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 RNU4-66P-201ENST00000365199 138 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 MIR888-201ENST00000401186 77 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.06□□□□□ -2.58
CFAP54Q96N23 AP000763.2-201ENST00000540641 163 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 AC018630.3-201ENST00000542637 96 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 AC004223.2-201ENST00000590309 544 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 AC008536.2-201ENST00000607284 349 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 TXNL1P1-201ENST00000429528 554 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 UBE2Q2P6-201ENST00000612666 153 ntBASIC-1.06□□□□□ -2.58
CFAP54Q96N23 MT-TM-201ENST00000387377 68 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.07□□□□□ -2.58
CFAP54Q96N23 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 MIR3152-201ENST00000579801 74 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 MTND5P31-201ENST00000419366 1374 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AC005562.2-201ENST00000618264 111 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AL596211.1-201ENST00000569873 2277 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AL133264.1-201ENST00000407157 562 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 AL355994.1-201ENST00000424379 260 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 USP9YP14-201ENST00000430663 563 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 MTCO3P27-201ENST00000514397 196 ntBASIC-1.07□□□□□ -2.58
CFAP54Q96N23 RNU6-965P-201ENST00000516721 96 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms