Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MIR4319-201ENST00000577285 85 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 BX322639.1-202ENST00000423987 2213 ntBASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK5RAP3Q96JB5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-525P-201ENST00000363685 104 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-944P-201ENST00000364023 107 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-280P-201ENST00000364145 104 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 SNORA51.11-201ENST00000384442 131 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNU2-63P-201ENST00000410792 194 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AC096638.1-201ENST00000444678 216 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 MTCO3P8-201ENST00000453691 755 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 SRIP1-201ENST00000489235 288 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP356-201ENST00000515972 94 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.721-201ENST00000517207 102 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AL442163.3-201ENST00000554110 156 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 MIR5092-201ENST00000583139 88 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AC008737.2-201ENST00000599446 118 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 RPS29P30-201ENST00000600975 111 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AL356575.1-201ENST00000603008 283 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AC124312.5-201ENST00000604451 268 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AC116312.1-201ENST00000606841 314 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 AC008121.3-201ENST00000618726 433 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK5RAP3Q96JB5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 SNORD32B-201ENST00000364460 84 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.455-201ENST00000384230 98 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP213-201ENST00000391031 106 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-823P-201ENST00000391042 103 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 MIR320B2-201ENST00000408479 138 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-985P-201ENST00000410182 104 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AL161788.1-201ENST00000441805 169 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-764P-201ENST00000516396 105 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AP002770.2-201ENST00000543613 532 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AC093023.1-201ENST00000547375 507 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AC125232.2-201ENST00000592457 143 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 SNRPGP20-201ENST00000604477 205 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 AC005562.2-201ENST00000618264 111 ntBASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDK5RAP3Q96JB5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP361-201ENST00000362686 118 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-1301P-201ENST00000362724 104 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.145-201ENST00000363527 102 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 SNORA18.2-201ENST00000383865 132 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.526-201ENST00000384572 110 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP184-201ENST00000411071 108 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-1001P-201ENST00000411265 100 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 AC007064.1-201ENST00000412238 351 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 AC093852.1-201ENST00000503587 266 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-1045P-201ENST00000516321 107 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 AC026470.2-201ENST00000561492 181 ntBASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDK5RAP3Q96JB5 AC062016.1-201ENST00000355719 319 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.27-201ENST00000362540 103 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 RNA5SP240-201ENST00000365355 128 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 MIR1294-201ENST00000408503 142 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 AC004386.2-201ENST00000441858 148 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 MIR449C-201ENST00000516047 92 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 Y_RNA.720-201ENST00000517166 92 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 AC022616.4-201ENST00000522985 181 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 DEFB131C-201ENST00000528817 165 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 AL355297.2-201ENST00000604792 129 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 TCL6_2.1-201ENST00000615162 119 ntBASIC2.86□□□□□ -1.95
CDK5RAP3Q96JB5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNU5F-3P-201ENST00000363767 117 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-245P-201ENST00000384020 107 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNU6-318P-201ENST00000384283 103 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 RNY3P4-201ENST00000384428 101 ntBASIC2.85□□□□□ -1.95
CDK5RAP3Q96JB5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms