Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
SIPA1Q96FS4 AP000907.4-201ENST00000604143 237 ntBASIC1.94□□□□□ -2.1
SIPA1Q96FS4 AC137590.2-201ENST00000619709 240 ntBASIC1.94□□□□□ -2.1
SIPA1Q96FS4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.94□□□□□ -2.1
SIPA1Q96FS4 MTND5P9-201ENST00000503854 1755 ntBASIC1.94□□□□□ -2.1
SIPA1Q96FS4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.573-201ENST00000384763 105 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 MIR300-201ENST00000401138 83 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 MIR1277-201ENST00000408536 78 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 RNA5SP118-201ENST00000410385 109 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 RNA5SP100-201ENST00000410903 110 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 RNA5SP59-201ENST00000410922 110 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 MTCO3P46-201ENST00000425787 232 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AL353572.1-201ENST00000442490 417 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AC010531.2-201ENST00000465012 153 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AC023043.2-201ENST00000589678 1026 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.93□□□□□ -2.1
SIPA1Q96FS4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.93□□□□□ -2.1
SIPA1Q96FS4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SIPA1Q96FS4 SNORD50.1-201ENST00000362987 71 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RNU6-877P-201ENST00000383868 107 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RNU6-790P-201ENST00000384479 105 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RNA5SP213-201ENST00000391031 106 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AL590632.1-201ENST00000424289 371 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AL513185.2-201ENST00000425543 193 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 MTATP6P13-201ENST00000438531 667 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 HMGB1P18-201ENST00000438801 619 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 DAP3P1-201ENST00000441522 278 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RPL23AP7-203ENST00000449021 469 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AC087477.1-201ENST00000465747 340 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RPL23AP75-201ENST00000491601 451 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.92□□□□□ -2.1
SIPA1Q96FS4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AC090617.10-201ENST00000624308 134 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 AL359697.1-201ENST00000624879 587 ntBASIC1.92□□□□□ -2.1
SIPA1Q96FS4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIPA1Q96FS4 RNU6-545P-201ENST00000362681 104 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
SIPA1Q96FS4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AL357134.1-201ENST00000445848 426 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC079354.2-201ENST00000453523 154 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 MTCO2P30-201ENST00000503662 364 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC097473.1-201ENST00000508142 408 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
SIPA1Q96FS4 SNORA59B-202ENST00000578183 701 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 U6atac.1-201ENST00000616025 117 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 AC009033.1-201ENST00000624279 431 ntBASIC1.91□□□□□ -2.1
SIPA1Q96FS4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SIPA1Q96FS4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 SNORD116-11-201ENST00000383882 92 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 Y_RNA.453-201ENST00000384223 109 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 MIR1283-1-201ENST00000408494 87 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AC004386.2-201ENST00000441858 148 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 GNAI2P1-201ENST00000541815 315 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 MIR4801-201ENST00000582704 82 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AP000942.3-201ENST00000603702 160 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.9□□□□□ -2.11
SIPA1Q96FS4 AC002553.4-201ENST00000616896 331 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 SCARNA4-201ENST00000629045 128 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 MIR3662-201ENST00000637030 95 ntBASIC1.9□□□□□ -2.11
SIPA1Q96FS4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms