Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC016727.2-201ENST00000603988 621 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC064836.2-201ENST00000609491 462 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC005562.2-201ENST00000618264 111 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC103705.1-201ENST00000619013 241 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU1-22P-201ENST00000363334 158 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-82P-201ENST00000363970 107 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-534P-201ENST00000364877 106 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-975P-201ENST00000384296 105 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNA5SP219-201ENST00000390940 113 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AC090960.1-201ENST00000421072 306 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AL353193.1-201ENST00000421444 268 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 snoU13.27-201ENST00000459278 104 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-498P-201ENST00000459468 107 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AC026470.2-201ENST00000561492 181 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 AC139792.3-201ENST00000623525 224 ntBASIC1.12□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1286P-201ENST00000383871 107 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1106P-201ENST00000390845 107 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 MRPL35P1-201ENST00000404272 572 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC004866.1-201ENST00000411748 78 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC007215.1-201ENST00000464893 276 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 MTCO3P38-201ENST00000468910 766 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 HMGN1P7-201ENST00000491722 313 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 SCOCP1-201ENST00000554676 349 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC080078.3-201ENST00000605407 463 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 TCL6_2.1-201ENST00000615162 119 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC009509.4-201ENST00000619202 509 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 AL359697.1-201ENST00000624879 587 ntBASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ECHDC3Q96DC8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 USP9YP14-201ENST00000430663 563 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC073910.1-201ENST00000445047 438 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC009237.7-201ENST00000447357 229 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 HMGB1P29-201ENST00000505659 499 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 RNU6-189P-201ENST00000516120 101 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 SNORA40.12-201ENST00000516329 111 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC087854.1-201ENST00000519706 414 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC004223.2-201ENST00000590309 544 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AC104458.1-201ENST00000608243 463 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 AL354950.2-201ENST00000617939 290 ntBASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ECHDC3Q96DC8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 SNORA4.2-201ENST00000365313 147 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1329P-201ENST00000365664 107 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AL606923.1-201ENST00000406616 190 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AC073464.1-201ENST00000429823 534 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AC004386.2-201ENST00000441858 148 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 TPTE2P5-203ENST00000458118 728 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 CENPUP1-201ENST00000526649 1202 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 MIR4753-201ENST00000585119 83 ntBASIC1.09□□□□□ -2.23
ECHDC3Q96DC8 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 SNORA33-201ENST00000363664 130 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 SNORA67.2-201ENST00000384300 149 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 AL606489.2-201ENST00000433886 234 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 AL118558.2-201ENST00000556294 238 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 CPDP1-201ENST00000579660 283 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
ECHDC3Q96DC8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms