Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 DAP3P1-201ENST00000441522 278 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 MTCO3P8-201ENST00000453691 755 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 RN7SL429P-201ENST00000479090 223 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 RN7SL489P-201ENST00000486185 223 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 RN7SL327P-201ENST00000488659 223 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 RPL23AP75-201ENST00000491601 451 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AF186996.7-201ENST00000492781 209 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 RNU6-314P-201ENST00000516574 104 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 RNA5SP384-201ENST00000516615 116 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 Y_RNA.704-201ENST00000516851 102 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 7SK.7-201ENST00000603504 247 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 RN7SL853P-201ENST00000617250 223 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AL078596.1-201ENST00000624856 447 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.64□□□□□ -2.15
PTP4A1Q93096 SCARNA4-201ENST00000629045 128 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PTP4A1Q93096 RNU4-9P-201ENST00000364951 139 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
PTP4A1Q93096 RNU6-245P-201ENST00000384020 107 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC060773.1-201ENST00000421698 310 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC245517.4-201ENST00000448601 281 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 RPL23AP63-201ENST00000498752 471 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.63□□□□□ -2.15
PTP4A1Q93096 ACA59.1-201ENST00000515966 143 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 RNU6-506P-201ENST00000516553 94 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.63□□□□□ -2.15
PTP4A1Q93096 MIR3976-201ENST00000606807 139 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC068205.3-201ENST00000636385 468 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 AC099654.12-201ENST00000639868 649 ntBASIC1.63□□□□□ -2.15
PTP4A1Q93096 ICE2P2-201ENST00000483823 2787 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNY3P3-201ENST00000363816 102 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU6-908P-201ENST00000410160 94 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU6-373P-201ENST00000411247 98 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC007098.1-201ENST00000420122 367 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC008134.1-201ENST00000420943 193 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 HMGN2P9-201ENST00000476875 229 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 Y_RNA.665-201ENST00000516177 98 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU6-344P-201ENST00000516635 111 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC126177.8-201ENST00000618339 1015 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 AC100821.1-201ENST00000523153 2479 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 ZNF204P-201ENST00000416749 2397 ntBASIC1.62□□□□□ -2.15
PTP4A1Q93096 snoU2-30.2-201ENST00000362805 70 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 Y_RNA.372-201ENST00000365599 102 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 Y_RNA.517-201ENST00000384551 106 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 MIR181A1-201ENST00000385026 110 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 AL117342.1-201ENST00000404861 406 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 COX6CP10-201ENST00000416832 224 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 RNU7-187P-201ENST00000458985 68 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 RNU7-57P-201ENST00000459540 60 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 HMGN2P26-201ENST00000463169 339 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 MTCO2P30-201ENST00000503662 364 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 SNORA59B-202ENST00000578183 701 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 AC103591.3-201ENST00000608684 209 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 MIR8063-201ENST00000621930 81 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.61□□□□□ -2.15
PTP4A1Q93096 MIR338-201ENST00000636369 67 ntBASIC1.61□□□□□ -2.15
PTP4A1Q93096 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
PTP4A1Q93096 SNORD115-32-201ENST00000364079 82 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 Y_RNA.615-201ENST00000410769 117 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 OOSP1P1-201ENST00000423265 274 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.6□□□□□ -2.15
PTP4A1Q93096 snoU13.27-201ENST00000459278 104 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 UBL5P3-201ENST00000475112 231 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 RPS29P11-201ENST00000496507 171 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
PTP4A1Q93096 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 RNA5SP437-201ENST00000517249 129 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC109635.3-201ENST00000529536 185 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.6□□□□□ -2.15
PTP4A1Q93096 SNORD11B-201ENST00000607707 90 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC092954.2-201ENST00000609103 430 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC015540.1-201ENST00000615828 501 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 AC006504.8-201ENST00000621046 635 ntBASIC1.6□□□□□ -2.15
PTP4A1Q93096 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.6□□□□□ -2.15
PTP4A1Q93096 RNU4-24P-201ENST00000364565 139 ntBASIC1.59□□□□□ -2.15
PTP4A1Q93096 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
PTP4A1Q93096 MIR549A-201ENST00000385268 96 ntBASIC1.59□□□□□ -2.15
PTP4A1Q93096 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PTP4A1Q93096 RNU6-780P-201ENST00000391030 104 ntBASIC1.59□□□□□ -2.15
PTP4A1Q93096 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms