Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 SNORD70.1-201ENST00000391007 85 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 TIMM9P3-201ENST00000428659 274 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 snoU13.6-201ENST00000458785 104 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AL590705.4-201ENST00000532209 134 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AC025423.5-201ENST00000550230 219 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AL121579.1-201ENST00000555129 305 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AP000240.1-201ENST00000609910 452 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 AC009541.1-201ENST00000438279 2662 ntBASIC0.67□□□□□ -2.3
CCDC12Q8WUD4 RNU6-1127P-201ENST00000384580 107 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 RNU7-182P-201ENST00000459009 62 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 SNORD79.1-201ENST00000516069 84 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 SNORD27.1-201ENST00000516319 72 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 RNU6-1069P-201ENST00000516612 133 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 ELOCP32-201ENST00000548625 324 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AGGF1P4-201ENST00000568249 801 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AL390123.1-201ENST00000603216 237 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 TUSC7.1-201ENST00000610969 165 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 AP000720.1-201ENST00000625091 483 ntBASIC0.66□□□□□ -2.3
CCDC12Q8WUD4 RNU6-266P-201ENST00000364225 107 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 RNU6-434P-201ENST00000384376 107 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 MIR1-2-201ENST00000384961 85 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 MIR549A-201ENST00000385268 96 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 Y_RNA.598-201ENST00000410480 95 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 RNU4-46P-201ENST00000410818 138 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 GPR143P-201ENST00000434155 205 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 UBE2D3P4-201ENST00000441973 436 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 RPS29P15-201ENST00000458329 171 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 AC024995.1-201ENST00000523014 93 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 AL513534.2-201ENST00000603836 250 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 AC005562.2-201ENST00000618264 111 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 U6.108-201ENST00000637764 58 ntBASIC0.65□□□□□ -2.31
CCDC12Q8WUD4 RNU6-505P-201ENST00000384427 107 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 MIR518E-201ENST00000385252 88 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 SNORA12.1-201ENST00000390873 148 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 RNU6-195P-201ENST00000411352 109 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC004866.1-201ENST00000411748 78 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC245047.7-201ENST00000440265 293 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC004386.2-201ENST00000441858 148 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC079781.2-201ENST00000446424 169 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 RNU6-1146P-201ENST00000516282 102 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 RNU6-922P-201ENST00000516753 99 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AP003072.2-201ENST00000527756 676 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 MTND1P8-201ENST00000571424 950 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 RSL24D1P11-201ENST00000591045 491 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 Z99497.2-201ENST00000603634 310 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 AC022217.4-201ENST00000604389 163 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 SEPT14P19-203ENST00000633205 211 ntBASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC12Q8WUD4 RNY4P34-201ENST00000364779 95 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 RNY1P14-201ENST00000384426 108 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AC106883.1-201ENST00000418805 562 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 RNU6-322P-201ENST00000516010 103 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 MTCO3P23-201ENST00000561363 289 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 MIR5006-201ENST00000583027 110 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AC068790.6-201ENST00000602558 258 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AL022161.1-201ENST00000604390 213 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 AC106754.2-201ENST00000623006 233 ntBASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC12Q8WUD4 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 RNA5SP323-201ENST00000391094 133 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AF228730.1-201ENST00000397972 663 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AC016909.1-201ENST00000415916 166 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 MTCO2P34-201ENST00000421994 607 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 NFU1P2-201ENST00000448700 469 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 RPS26P48-201ENST00000491713 339 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AC105758.1-201ENST00000506038 399 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 RNU6-323P-201ENST00000521915 107 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 MIR4703-201ENST00000577728 79 ntBASIC0.62□□□□□ -2.31
CCDC12Q8WUD4 SNORA4-201ENST00000584302 138 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms