Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.4□□□□□ -2.03
SNED1Q8TER0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.4□□□□□ -2.03
SNED1Q8TER0 SNRPGP19-201ENST00000603826 189 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 AL121917.1-203ENST00000605534 577 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 RNU6-6P-201ENST00000606623 107 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 MIR8070-201ENST00000616510 88 ntBASIC2.4□□□□□ -2.03
SNED1Q8TER0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.4□□□□□ -2.03
SNED1Q8TER0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNED1Q8TER0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.39□□□□□ -2.03
SNED1Q8TER0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SNED1Q8TER0 Y_RNA.33-201ENST00000362591 102 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 RNU6-395P-201ENST00000365662 106 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 RPL21P1-201ENST00000399532 476 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNED1Q8TER0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 RNU6-1025P-201ENST00000410629 104 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 HMGN2P35-201ENST00000412164 270 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC073910.1-201ENST00000445047 438 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.39□□□□□ -2.03
SNED1Q8TER0 AL583843.1-201ENST00000456070 346 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC093852.1-201ENST00000503587 266 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 Y_RNA.687-201ENST00000516558 91 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.39□□□□□ -2.03
SNED1Q8TER0 CPDP1-201ENST00000579660 283 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC123912.5-201ENST00000605470 343 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 FTX_3.1-201ENST00000610451 147 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 MIR1244-1-201ENST00000612829 85 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC078938.1-201ENST00000620993 318 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC138627.2-201ENST00000624202 601 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 MIR1244-3-201ENST00000635744 85 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 MIR1244-2-201ENST00000636449 85 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 MIR1244-4-202ENST00000636813 85 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
SNED1Q8TER0 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNED1Q8TER0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNU4-42P-201ENST00000364738 142 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNA5SP190-201ENST00000365222 118 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNU6-140P-201ENST00000384566 108 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 Y_RNA.533-201ENST00000384596 114 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 MIR521-1-201ENST00000384902 87 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 SNORA40.18-201ENST00000391200 128 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SNED1Q8TER0 MIR888-201ENST00000401186 77 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNU2-33P-201ENST00000410344 192 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 PGBD4P6-201ENST00000421501 610 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 ELOCP20-201ENST00000422460 345 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AIG1P1-201ENST00000503376 148 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 RNU2-53P-201ENST00000516257 147 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.38□□□□□ -2.03
SNED1Q8TER0 VN1R91P-201ENST00000594377 169 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AL109918.3-201ENST00000603072 338 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 AL161798.1-201ENST00000604630 131 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 RMST_4.1-201ENST00000616886 107 ntBASIC2.38□□□□□ -2.03
SNED1Q8TER0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNED1Q8TER0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 RNU6-770P-201ENST00000363929 105 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 RNU6-472P-201ENST00000384299 107 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 SNORA51.11-201ENST00000384442 131 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 Y_RNA.526-201ENST00000384572 110 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 AL591034.2-201ENST00000402839 359 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 RNA5SP270-201ENST00000411361 118 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 AC092423.1-201ENST00000430165 186 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 SNORD127-201ENST00000458892 86 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 RPL23AP63-201ENST00000498752 471 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 MRPS36P2-201ENST00000512569 299 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 SNORA25.11-201ENST00000515935 105 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 AC023157.2-201ENST00000540596 141 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 AL391261.3-201ENST00000557194 520 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 RPS29P30-201ENST00000600975 111 ntBASIC2.37□□□□□ -2.03
SNED1Q8TER0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SNED1Q8TER0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
SNED1Q8TER0 MIR412-201ENST00000362142 91 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 RNU6-384P-201ENST00000364900 104 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 MT-TW-201ENST00000387382 68 ntBASIC2.36□□□□□ -2.03
SNED1Q8TER0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms