Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 RNU6-514P-201ENST00000384208 107 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 MT-TR-201ENST00000387439 65 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 SNORD58.1-201ENST00000391313 66 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 POLR2KP2-201ENST00000438155 177 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AL139109.1-201ENST00000455491 297 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC140059.1-201ENST00000489238 361 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 SEM1P1-201ENST00000506694 209 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 RNU4-71P-201ENST00000516258 113 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC004467.1-201ENST00000615678 330 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AL590240.4-201ENST00000616908 390 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 SNORA50A-202ENST00000629536 136 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 MIR3674-201ENST00000636576 68 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDH19Q8TAB3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.89
PCDH19Q8TAB3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 SNORA25.1-201ENST00000362326 128 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 AC009310.1-201ENST00000414414 451 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 MICF-203ENST00000432679 129 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 RNU6-107P-201ENST00000516643 102 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 UBL5P2-201ENST00000583788 219 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 AC068205.3-201ENST00000636385 468 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 MIR7515-201ENST00000637837 67 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 AC000403.1-201ENST00000613696 3585 ntBASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDH19Q8TAB3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 MIR410-201ENST00000362222 80 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 SNORD32B-201ENST00000364460 84 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 RNU6-200P-201ENST00000364743 107 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 RPS29P12-201ENST00000460178 152 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 DEFB131C-201ENST00000528817 165 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 AC055872.1-201ENST00000570978 278 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 AC009779.6-201ENST00000603972 165 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 AL162274.2-201ENST00000614406 332 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 MIR7157-201ENST00000635801 60 ntBASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PCDH19Q8TAB3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.383-201ENST00000383855 97 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 SNORA12-201ENST00000391162 147 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 AC004866.1-201ENST00000411748 78 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 RPL27AP5-201ENST00000469428 449 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
PCDH19Q8TAB3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 RNY1-201ENST00000364228 113 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 SNORA59A-201ENST00000459326 152 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 RNU1-117P-201ENST00000517041 158 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AC006380.1-201ENST00000603598 186 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AC091932.3-201ENST00000624223 323 ntBASIC3.18□□□□□ -1.9
PCDH19Q8TAB3 AC135776.4-201ENST00000624300 1904 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms