Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MIR95-201ENST00000385072 81 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 RPS26P42-201ENST00000413485 326 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 AC007098.1-201ENST00000420122 367 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 UBL5P3-201ENST00000475112 231 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.36□□□□□ -2.03
BEST2Q8NFU1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST2Q8NFU1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-874P-201ENST00000362390 105 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-490P-201ENST00000362985 107 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.197-201ENST00000364004 102 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.319-201ENST00000365138 92 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 MIR190B-201ENST00000401119 79 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-1156P-201ENST00000410365 100 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 AL445305.1-201ENST00000432577 575 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 MIR449C-201ENST00000516047 92 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 RNU6-965P-201ENST00000516721 96 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 SNORA48.11-201ENST00000517015 89 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 AC016727.2-201ENST00000603988 621 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 CYP2C61P-201ENST00000604072 290 ntBASIC2.35□□□□□ -2.03
BEST2Q8NFU1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.35□□□□□ -2.03
BEST2Q8NFU1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RNU6-222P-201ENST00000362438 107 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.106-201ENST00000363189 100 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RNU6-694P-201ENST00000364071 147 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 SNORD32B-201ENST00000364460 84 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 SNORD42.2-201ENST00000365570 69 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RNU6-541P-201ENST00000384709 110 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 MTCO2P12-201ENST00000427426 682 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RNU7-87P-201ENST00000459343 62 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RNA5SP82-201ENST00000516707 92 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 AC027288.2-201ENST00000553028 243 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 AC090517.1-201ENST00000569307 266 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 AL449363.1-201ENST00000617815 186 ntBASIC2.34□□□□□ -2.03
BEST2Q8NFU1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
BEST2Q8NFU1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
BEST2Q8NFU1 AC005336.3-201ENST00000623833 2679 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.5-201ENST00000362334 102 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.138-201ENST00000363462 102 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.314-201ENST00000365114 102 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 MIR625-201ENST00000385047 85 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 RNU2-32P-201ENST00000411193 191 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST2Q8NFU1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST2Q8NFU1 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.639-201ENST00000458981 102 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 AP000870.1-201ENST00000472927 406 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST2Q8NFU1 RNU6-1153P-201ENST00000516760 105 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.701-201ENST00000516812 110 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 UBL5P4-201ENST00000562584 236 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.33□□□□□ -2.04
BEST2Q8NFU1 ZNF204P-201ENST00000416749 2397 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 MTND5P16-201ENST00000460269 1703 ntBASIC2.33□□□□□ -2.04
BEST2Q8NFU1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 RNY3P11-201ENST00000364153 102 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 SNORA18.2-201ENST00000383865 132 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.428-201ENST00000384078 102 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 MIR504-201ENST00000385065 83 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 RNU6-308P-201ENST00000390957 107 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 MIR1294-201ENST00000408503 142 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 MTND1P14-201ENST00000427400 950 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 AC027124.2-201ENST00000428249 105 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 CBX3P6-201ENST00000430257 527 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 AC007677.1-201ENST00000445757 515 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 RNU6-976P-201ENST00000516086 111 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 RNU6-58P-201ENST00000517143 103 ntBASIC2.32□□□□□ -2.04
BEST2Q8NFU1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.32□□□□□ -2.04
BEST2Q8NFU1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms