Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SNORA40.12-201ENST00000516329 111 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-567P-201ENST00000516746 107 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 BCRP9-201ENST00000605312 388 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 AC122133.1-201ENST00000613964 233 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 AC006001.4-201ENST00000622243 395 ntBASIC-0.34□□□□□ -2.46
SPTSSBQ8NFR3 RNU6-552P-201ENST00000362869 119 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 MIR1276-201ENST00000408707 83 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AL663109.1-201ENST00000411498 844 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 SEPT7P4-201ENST00000437076 306 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AP000870.1-201ENST00000472927 406 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AC079382.1-201ENST00000493346 557 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 RN7SKP164-201ENST00000516138 266 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 MIR5190-201ENST00000581537 80 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 Z99497.2-201ENST00000603634 310 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AL078603.1-201ENST00000603824 313 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AC104695.3-201ENST00000604052 296 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AL158042.1-201ENST00000605338 460 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 SNORA28-201ENST00000606769 126 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 uc_338.34-201ENST00000617467 174 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 AL136221.1-201ENST00000621449 509 ntBASIC-0.35□□□□□ -2.47
SPTSSBQ8NFR3 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-514P-201ENST00000384208 107 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 MIR1253-201ENST00000408273 105 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AL139396.1-201ENST00000421137 167 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 CALM2P4-201ENST00000430810 426 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 SNRPGP7-201ENST00000469016 106 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 RNA5SP216-201ENST00000516111 123 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 RNU2-10P-201ENST00000516375 211 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AL137100.2-201ENST00000555786 315 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AC012409.4-201ENST00000612923 249 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 AC078880.5-201ENST00000617845 421 ntBASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-369P-201ENST00000362515 102 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-462P-201ENST00000362659 105 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-769P-201ENST00000384407 104 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-700P-201ENST00000391043 107 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 U8.16-201ENST00000391279 133 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 USP9YP11-201ENST00000427537 717 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 AC016632.1-201ENST00000503994 196 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 RPL23AP91-201ENST00000569211 455 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 MIR3612-201ENST00000579753 87 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 MIR4298-201ENST00000584380 73 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 PART1_2.1-201ENST00000612397 250 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 RMST_2.1-201ENST00000617263 136 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
SPTSSBQ8NFR3 MIR1-1-201ENST00000362147 71 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 SNORD113.3-201ENST00000364630 78 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-336P-201ENST00000364891 107 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 MIR644A-201ENST00000385262 94 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 MIR208B-201ENST00000401172 77 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-607P-201ENST00000411283 108 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 RPS3AP3-201ENST00000411933 242 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC106883.1-201ENST00000418805 562 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC006366.1-201ENST00000422002 759 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 SNAP23P1-201ENST00000433229 246 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AL596276.1-201ENST00000434465 418 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 MTND4P15-201ENST00000437913 1033 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC013470.1-201ENST00000453438 462 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC093850.1-201ENST00000454121 251 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 RPL23AP54-201ENST00000495129 419 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AC023157.2-201ENST00000540596 141 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 ADI1P3-201ENST00000549509 470 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AL596327.1-201ENST00000603629 213 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 MTND3P19-201ENST00000603825 345 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 RBM11P1-201ENST00000604951 799 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 AP002802.2-201ENST00000605877 235 ntBASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.38□□□□□ -2.47
SPTSSBQ8NFR3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-609P-201ENST00000365459 107 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 SNORA40.2-201ENST00000390847 128 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 RNA5SP63-201ENST00000391225 112 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 RPS29P13-201ENST00000402041 169 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 snoU13.18-201ENST00000459483 104 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 RNU7-94P-201ENST00000459576 63 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 AC010486.2-201ENST00000505572 483 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 MIR4300-201ENST00000581016 96 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 MIR4305-201ENST00000583252 102 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 AL117336.2-201ENST00000602435 335 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 AC108747.1-201ENST00000609508 535 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 429.2 ms