Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORA31.4-201ENST00000516049 129 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC004584.2-201ENST00000570407 410 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 SNORA77B-201ENST00000578179 125 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 BCRP9-201ENST00000605312 388 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU4-32P-201ENST00000363404 141 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNY3P13-201ENST00000365542 102 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU6-533P-201ENST00000384144 107 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU6-1025P-201ENST00000410629 104 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 MTND3P17-201ENST00000416968 344 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC099677.2-201ENST00000436385 175 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 HMGN2P34-201ENST00000437647 269 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 HMGN2P9-201ENST00000476875 229 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RPL26P26-201ENST00000480251 434 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AL442163.3-201ENST00000554110 156 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 MIR3118-1-201ENST00000581787 76 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 BNIP3P40-201ENST00000596017 556 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 DPPA3P3-201ENST00000603842 430 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC107308.1-201ENST00000615897 301 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 SNORA63D-201ENST00000364359 132 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU6-505P-201ENST00000384427 107 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RPS27AP14-201ENST00000422868 454 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 SNAP23P1-201ENST00000433229 246 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU7-94P-201ENST00000459576 63 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AP000870.1-201ENST00000472927 406 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AP000797.1-201ENST00000478870 387 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 RNU2-34P-201ENST00000516534 121 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 MRPS36P4-201ENST00000534436 298 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC110760.3-201ENST00000598794 467 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AC019226.2-201ENST00000625973 424 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 AL157786.1-207ENST00000627771 695 ntBASIC0.12□□□□□ -2.39
SYNE1Q8NF91 BX322639.1-202ENST00000423987 2213 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD115-41-201ENST00000363608 82 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU4-92P-201ENST00000363783 136 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.192-201ENST00000363977 102 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU6-636P-201ENST00000384598 107 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR578-201ENST00000384828 96 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR515-2-201ENST00000384883 83 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR515-1-201ENST00000384884 83 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNA5SP467-201ENST00000391274 118 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RPL23AP30-201ENST00000432419 501 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 BRK1P2-201ENST00000442875 223 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 HSPE1P13-201ENST00000451143 297 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC112204.1-201ENST00000502591 103 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU7-128P-201ENST00000517247 62 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR4305-201ENST00000583252 102 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL121895.2-201ENST00000619558 447 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AP002782.1-201ENST00000623107 614 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD113.3-201ENST00000364630 78 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR214-201ENST00000385214 110 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR153-2-201ENST00000385225 87 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU4-46P-201ENST00000410818 138 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 EEF1A1P40-201ENST00000412883 573 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 EXOSC3P1-201ENST00000448649 500 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU7-21P-201ENST00000459430 62 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD116-28-201ENST00000516123 91 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNA5SP134-201ENST00000516492 96 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNA5SP168-201ENST00000516642 112 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORA70.22-201ENST00000517160 124 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR3913-1-201ENST00000577744 102 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL158042.1-201ENST00000605338 460 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC121334.2-201ENST00000605387 271 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC005562.2-201ENST00000618264 111 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR1262-201ENST00000408276 93 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MTCO2P3-201ENST00000442543 421 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AP001893.2-201ENST00000526949 202 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 ZNF519P3-201ENST00000557158 1032 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC104465.1-201ENST00000611365 139 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC022202.1-201ENST00000613515 211 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC008147.4-201ENST00000617570 1204 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC022418.1-201ENST00000624118 445 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL445523.1-201ENST00000451184 1362 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU6-534P-201ENST00000364877 106 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU6-1176P-201ENST00000390955 107 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU6-1093P-201ENST00000391194 107 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC010531.2-201ENST00000465012 153 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.659-201ENST00000515994 113 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 BNIP3P6-201ENST00000549284 499 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC087883.1-201ENST00000551882 391 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms