Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MIR32-201ENST00000384965 70 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.594-201ENST00000410373 140 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 RNU4-14P-201ENST00000410858 122 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AL135786.1-201ENST00000415892 214 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC004386.2-201ENST00000441858 148 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC107399.1-201ENST00000451226 265 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 RPS23P5-201ENST00000495419 428 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC116353.2-201ENST00000505332 712 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.670-201ENST00000516255 105 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC026470.2-201ENST00000561492 181 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 MIR3169-201ENST00000578032 83 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 MIR4273-201ENST00000582824 84 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AL590240.4-201ENST00000616908 390 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 AC137590.2-201ENST00000619709 240 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 BX322639.1-202ENST00000423987 2213 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 RNU6-545P-201ENST00000362681 104 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.48-201ENST00000362710 103 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 RNU6-595P-201ENST00000363944 107 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 RNU6-593P-201ENST00000364716 112 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 RPL37P10-201ENST00000412884 288 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 snoU13.30-201ENST00000458951 104 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 MTND4P17-201ENST00000470444 350 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 CBX3P8-201ENST00000532412 525 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 AC027288.2-201ENST00000553028 243 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 AC243960.4-201ENST00000600532 288 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 RMST_6.1-201ENST00000611980 203 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 TCL6_2.1-201ENST00000615162 119 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC63Q8NA47 ZNF299P-201ENST00000406845 1804 ntBASIC1.88□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.303-201ENST00000364998 94 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC63Q8NA47 RNU6-17P-201ENST00000384245 107 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 RNU6-18P-201ENST00000384527 107 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 RNU6-601P-201ENST00000384540 107 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AL356432.1-201ENST00000405809 419 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 RNU6-1050P-201ENST00000410388 107 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 MTCO3P29-201ENST00000432119 779 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC63Q8NA47 MTCO1P44-201ENST00000441935 243 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AC010531.2-201ENST00000465012 153 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AC022513.1-201ENST00000624512 117 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 TPTEP1-208ENST00000636884 213 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 MIR219B-201ENST00000637023 88 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 ZNF204P-201ENST00000416749 2397 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.404-201ENST00000383978 102 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.482-201ENST00000384377 111 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC098614.3-201ENST00000438957 440 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC009237.7-201ENST00000447357 229 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 MTND3P10-201ENST00000450967 341 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 RNU1-131P-201ENST00000458943 161 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AP001486.1-201ENST00000463339 476 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 RNU6-58P-201ENST00000517143 103 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AP005660.1-201ENST00000522972 293 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC005668.1-201ENST00000571142 476 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 MIR5006-201ENST00000583027 110 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC005014.2-201ENST00000607795 599 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AC009229.3-201ENST00000608056 282 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 AL355073.2-201ENST00000612106 557 ntBASIC1.86□□□□□ -2.11
CCDC63Q8NA47 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC63Q8NA47 RNU6-23P-201ENST00000363283 107 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 RNU6-438P-201ENST00000365561 103 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC63Q8NA47 RPL7P42-201ENST00000481005 679 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 RNA5SP384-201ENST00000516615 116 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.708-201ENST00000516950 96 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 AL590705.4-201ENST00000532209 134 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 AC104581.2-201ENST00000572227 430 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 MIR5701-3-201ENST00000578890 82 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 MIR4801-201ENST00000582704 82 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms