Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC005562.2-201ENST00000618264 111 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 uc_338.22-201ENST00000622722 187 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 AC134503.1-201ENST00000633048 54 ntBASIC2.23□□□□□ -2.05
BEST3Q8N1M1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 ZNF204P-201ENST00000416749 2397 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU6-874P-201ENST00000362390 105 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.128-201ENST00000363391 112 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU6-280P-201ENST00000364145 104 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.314-201ENST00000365114 102 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU6-245P-201ENST00000384020 107 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU1-138P-201ENST00000384093 164 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 SNORA70B-201ENST00000384210 135 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 SNORA69.1-201ENST00000390904 137 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU1-139P-201ENST00000391307 165 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AC027124.2-201ENST00000428249 105 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AC009238.1-201ENST00000442165 424 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AC009237.6-201ENST00000446969 424 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AP000870.1-201ENST00000472927 406 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 RNU6-1114P-201ENST00000516022 107 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AC044792.1-201ENST00000593294 196 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 AC091925.1-201ENST00000623204 462 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 MTND5P16-201ENST00000460269 1703 ntBASIC2.22□□□□□ -2.05
BEST3Q8N1M1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
BEST3Q8N1M1 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 RNU6-694P-201ENST00000364071 147 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 RNU1-115P-201ENST00000365329 160 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 MTND1P14-201ENST00000427400 950 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.631-201ENST00000459607 101 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 MIR2355-201ENST00000517199 87 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC023442.1-201ENST00000531247 422 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 MIR5194-201ENST00000582634 120 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC087588.2-201ENST00000617667 426 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 AC022140.2-201ENST00000623500 188 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
BEST3Q8N1M1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
BEST3Q8N1M1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 U8.2-201ENST00000363156 134 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU6-234P-201ENST00000365229 104 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 SNORA25B-201ENST00000365507 128 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 SNORA18.2-201ENST00000383865 132 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU6-474P-201ENST00000384243 107 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU6-611P-201ENST00000384276 104 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 MIR10B-201ENST00000385011 110 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 MIR1261-201ENST00000408659 82 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.605-201ENST00000410577 105 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AL354751.2-201ENST00000415471 210 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC114482.1-201ENST00000418010 247 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC007677.1-201ENST00000445757 515 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC107032.1-201ENST00000485945 480 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC018868.1-201ENST00000491307 315 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RPS23P5-201ENST00000495419 428 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 MIR449C-201ENST00000516047 92 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNA5SP281-201ENST00000516504 135 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU6-965P-201ENST00000516721 96 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 RNU2-44P-201ENST00000516795 194 ntBASIC2.2□□□□□ -2.06
BEST3Q8N1M1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
BEST3Q8N1M1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU6-222P-201ENST00000362438 107 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU1-76P-201ENST00000362903 159 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.138-201ENST00000363462 102 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.496-201ENST00000384444 101 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.557-201ENST00000384680 107 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR1302-11-201ENST00000408051 138 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR548P-201ENST00000408336 84 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR1302-9-201ENST00000408365 138 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 MIR1302-10-201ENST00000408734 138 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 Y_RNA.592-201ENST00000410274 109 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 RNU2-48P-201ENST00000410694 191 ntBASIC2.19□□□□□ -2.06
BEST3Q8N1M1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms