Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-862P-201ENST00000362804 105 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1286P-201ENST00000383871 107 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-418P-201ENST00000384035 107 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.481-201ENST00000384373 102 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 MIR549A-201ENST00000385268 96 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1106P-201ENST00000390845 107 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-780P-201ENST00000391030 104 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1068P-201ENST00000410958 103 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-325P-201ENST00000411132 105 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 MTCO1P21-201ENST00000416634 589 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AF186996.7-201ENST00000492781 209 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC067942.3-201ENST00000512025 362 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 RNU6-856P-201ENST00000516959 98 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 SUMO2P18-201ENST00000518873 252 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 AC083806.3-201ENST00000614016 455 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 OR5AK4P-201ENST00000635912 903 ntBASIC1.39□□□□□ -2.19
CCDC65Q8IXS2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.123-201ENST00000363338 102 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1085P-201ENST00000363576 107 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 EIF4E2P1-201ENST00000393781 255 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 MIR450B-201ENST00000401182 78 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 RNA5SP437-201ENST00000517249 129 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 FGF7P1-201ENST00000582820 288 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 PIGPP4-201ENST00000584447 307 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 AC104458.1-201ENST00000608243 463 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 AC092954.2-201ENST00000609103 430 ntBASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC65Q8IXS2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC091812.1-201ENST00000432235 1948 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.231-201ENST00000364358 102 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC015922.2-201ENST00000435593 184 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC007215.1-201ENST00000464893 276 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 RPL26P26-201ENST00000480251 434 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC083904.1-201ENST00000487828 231 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC025465.3-201ENST00000510570 311 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 MTND2P38-201ENST00000522536 667 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AP000942.3-201ENST00000603702 160 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC005562.2-201ENST00000618264 111 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC095038.3-201ENST00000634439 195 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 AC068137.3-201ENST00000639191 341 ntBASIC1.37□□□□□ -2.19
CCDC65Q8IXS2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MIR302D-201ENST00000362275 68 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-254P-201ENST00000363377 107 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 SNORD113-7-201ENST00000363762 77 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 SNORA63D-201ENST00000364359 132 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 Y_RNA.372-201ENST00000365599 102 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-784P-201ENST00000384330 106 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MIR548B-201ENST00000385247 97 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MIR1283-1-201ENST00000408494 87 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-908P-201ENST00000410160 94 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNA5SP494-201ENST00000410653 129 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MRPS10P2-201ENST00000431226 381 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC004386.2-201ENST00000441858 148 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 U8.21-201ENST00000459536 136 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNA5SP384-201ENST00000516615 116 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RNU6-1332P-201ENST00000516666 104 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC084364.2-201ENST00000546924 395 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 RRN3P3-201ENST00000549207 578 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC023043.2-201ENST00000589678 1026 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC073413.2-201ENST00000604332 360 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AC004492.1-201ENST00000607036 742 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 MIR8076-201ENST00000611401 83 ntBASIC1.36□□□□□ -2.19
CCDC65Q8IXS2 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms