Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AF186996.7-201ENST00000492781 209 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1332P-201ENST00000516666 104 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AP003033.1-201ENST00000527244 415 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC026470.2-201ENST00000561492 181 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC104458.1-201ENST00000608243 463 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 Z99129.1-201ENST00000612510 255 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 FAM157A-202ENST00000615155 405 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC126177.8-201ENST00000618339 1015 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC097520.1-201ENST00000624435 385 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC095038.3-201ENST00000634439 195 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 OR5AK4P-201ENST00000635912 903 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU1-17P-201ENST00000363022 152 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-214P-201ENST00000384130 107 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 MIR521-1-201ENST00000384902 87 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 MIR764-201ENST00000390811 85 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-360P-201ENST00000390944 104 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 MTCO3P40-201ENST00000392516 676 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 EIF4E2P1-201ENST00000393781 255 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 USP9YP14-201ENST00000430663 563 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC016717.1-201ENST00000448918 286 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 MTCO3P8-201ENST00000453691 755 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC011406.1-201ENST00000512440 370 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 RNA5SP384-201ENST00000516615 116 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 CPDP1-201ENST00000579660 283 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 FGF7P1-201ENST00000582820 288 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AP000907.4-201ENST00000604143 237 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 TCL6_2.1-201ENST00000615162 119 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 BX322639.1-202ENST00000423987 2213 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC100821.1-201ENST00000523153 2479 ntBASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
NUDCD3Q8IVD9 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 SNORA63D-201ENST00000364359 132 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-522P-201ENST00000364497 107 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 SNORD116-1-201ENST00000384335 95 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 snoU13.23-201ENST00000458863 104 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 AC083904.1-201ENST00000487828 231 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MTCO1P29-201ENST00000496868 288 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 RRN3P3-201ENST00000549207 578 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MIR4298-201ENST00000584380 73 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MIR8076-201ENST00000611401 83 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MIR6715A-201ENST00000615929 79 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 AC124864.2-201ENST00000624736 186 ntBASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
NUDCD3Q8IVD9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
NUDCD3Q8IVD9 AC121333.1-201ENST00000567488 2709 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 Y_RNA.51-201ENST00000362725 102 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 Y_RNA.231-201ENST00000364358 102 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 MIR487A-201ENST00000385009 80 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 MIR450B-201ENST00000401182 78 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU6-1068P-201ENST00000410958 103 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AC009237.7-201ENST00000447357 229 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 Y_RNA.693-201ENST00000516641 110 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU6-902P-201ENST00000517212 91 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AC100830.2-201ENST00000581636 240 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AC146944.4-201ENST00000602697 718 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU6-89P-201ENST00000606519 100 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 AL359880.1-201ENST00000621879 266 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
NUDCD3Q8IVD9 RNU6-780P-201ENST00000391030 104 ntBASIC1.26□□□□□ -2.21
NUDCD3Q8IVD9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.26□□□□□ -2.21
NUDCD3Q8IVD9 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
NUDCD3Q8IVD9 MTCO3P29-201ENST00000432119 779 ntBASIC1.26□□□□□ -2.21
NUDCD3Q8IVD9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms