Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC007677.1-201ENST00000445757 515 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 MTND3P10-201ENST00000450967 341 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 PRELID3BP1-201ENST00000457142 540 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 snoU13.6-201ENST00000458785 104 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 HMGN1P12-201ENST00000499125 195 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 Y_RNA.691-201ENST00000516611 103 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC71Q8IV32 MIR4273-201ENST00000582824 84 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 SCARNA4-201ENST00000629045 128 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.8□□□□□ -2.12
CCDC71Q8IV32 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 RNU4-9P-201ENST00000364951 139 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 SNORD81.2-201ENST00000365153 76 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 SNORA40.19-201ENST00000390846 128 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 RPS3AP52-201ENST00000435639 297 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC098614.3-201ENST00000438957 440 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC245102.2-201ENST00000448956 180 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 OR2AQ1P-201ENST00000451972 200 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC055731.1-201ENST00000474387 401 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC026782.1-201ENST00000512952 449 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 RNU6-1016P-201ENST00000516689 94 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC018462.2-201ENST00000605375 395 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AL355073.2-201ENST00000612106 557 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 AC022202.1-201ENST00000613515 211 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.79□□□□□ -2.12
CCDC71Q8IV32 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CCDC71Q8IV32 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 Y_RNA.482-201ENST00000384377 111 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL357139.1-201ENST00000407792 426 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 RNU2-41P-201ENST00000410991 178 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 RPL37P10-201ENST00000412884 288 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC007215.1-201ENST00000464893 276 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC087477.1-201ENST00000465747 340 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC107032.1-201ENST00000485945 480 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC103851.1-201ENST00000506833 274 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC093259.1-201ENST00000509755 300 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 MIR449C-201ENST00000516047 92 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC110588.1-201ENST00000559699 137 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AP001094.1-201ENST00000579805 193 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AL359314.1-201ENST00000616913 261 ntBASIC1.78□□□□□ -2.12
CCDC71Q8IV32 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CCDC71Q8IV32 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CCDC71Q8IV32 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71Q8IV32 RNU1-76P-201ENST00000362903 159 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 Y_RNA.88-201ENST00000363029 99 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 Y_RNA.184-201ENST00000363884 108 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 SNORD115-32-201ENST00000364079 82 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 RNU6-842P-201ENST00000384269 107 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 HMGN2P39-201ENST00000398005 273 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 MIR1262-201ENST00000408276 93 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 AC243428.1-201ENST00000421099 264 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC71Q8IV32 AL035666.1-201ENST00000446195 348 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 HMGN2P18-201ENST00000450680 270 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 FO393415.2-201ENST00000480085 343 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 SNORA31.25-201ENST00000517242 134 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 AC099654.5-201ENST00000636479 350 ntBASIC1.77□□□□□ -2.13
CCDC71Q8IV32 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC71Q8IV32 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC71Q8IV32 MTND4P12-201ENST00000498999 1377 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC71Q8IV32 RNU6-1059P-201ENST00000363752 98 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 SNORD115-8-201ENST00000363856 82 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 RNU6-743P-201ENST00000364151 106 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 SNORD115-38-201ENST00000365037 82 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 Y_RNA.490-201ENST00000384413 102 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 RNU6-1050P-201ENST00000410388 107 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 RPL31P63-201ENST00000422565 375 ntBASIC1.76□□□□□ -2.13
CCDC71Q8IV32 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms