Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010469.1-201ENST00000463864 576 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 HMGB3P3-201ENST00000510526 400 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 RNU6-62P-201ENST00000516526 102 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 AP005660.1-201ENST00000522972 293 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 MIR3616-201ENST00000584070 92 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 AC006380.1-201ENST00000603598 186 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 YPEL5P2-201ENST00000605553 359 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 snoU18.1-201ENST00000629629 71 ntBASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NPAS4Q8IUM7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 RNU6-211P-201ENST00000384047 107 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 RNU6-1154P-201ENST00000391001 104 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 SNORA48.8-201ENST00000391324 134 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 AC146507.2-201ENST00000460608 476 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 AC023141.11-201ENST00000508864 202 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 RNA5SP154-201ENST00000516193 111 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 RNU6-579P-201ENST00000516879 102 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 MIR3145-201ENST00000580727 82 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 AC015813.4-201ENST00000610469 179 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 MIR8057-201ENST00000620957 69 ntBASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPAS4Q8IUM7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNU1-75P-201ENST00000347264 129 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNU6-653P-201ENST00000363074 106 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNA5SP197-201ENST00000363357 119 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 SNORA22C-201ENST00000384614 134 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 SNORA48.2-201ENST00000390926 124 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.580-201ENST00000391004 95 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 FO393413.1-201ENST00000402892 195 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AL357075.1-201ENST00000404107 726 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AL357139.1-201ENST00000407792 426 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNU2-63P-201ENST00000410792 194 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 TOMM22P2-201ENST00000430735 237 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 Z75741.1-201ENST00000446793 314 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AC114982.1-201ENST00000469402 321 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 SRIP1-201ENST00000489235 288 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNU6-313P-201ENST00000516317 112 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 RNU6-479P-201ENST00000516348 105 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AC022441.3-201ENST00000605737 136 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 AC091895.1-201ENST00000624494 256 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 MTND1P7-201ENST00000632801 297 ntBASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPAS4Q8IUM7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 AC080128.1-201ENST00000474389 1917 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 RNU4-80P-201ENST00000363200 141 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.343-201ENST00000365354 112 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 MIR300-201ENST00000401138 83 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 RN7SKP111-201ENST00000410349 271 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 ELOCP21-201ENST00000412558 336 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 RPL23AP58-201ENST00000440453 469 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 DEFB131C-201ENST00000528817 165 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 MIR7112-201ENST00000616126 65 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 AC008873.1-201ENST00000625051 138 ntBASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
NPAS4Q8IUM7 AC138915.1-201ENST00000565427 1685 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 U3.8-201ENST00000363675 217 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 RNU6-818P-201ENST00000364837 108 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 RNU6-417P-201ENST00000384712 107 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 Y_RNA.571-201ENST00000384753 98 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 RNA5SP104-201ENST00000410989 118 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AL513477.1-202ENST00000417061 214 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AL162725.1-201ENST00000435405 301 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 RNU6-191P-201ENST00000516295 94 ntBASIC3.79□□□□□ -1.8
NPAS4Q8IUM7 IGKV2-26-201ENST00000518305 343 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms