| HOOK3 | Q86VS8 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | MTND1P5-201 | ENST00000517906 | 940 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC092490.2-202 | ENST00000544922 | 462 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC023796.2-201 | ENST00000545410 | 451 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC009269.4-201 | ENST00000557828 | 440 nt | TSL 3 BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | MIR5094-201 | ENST00000578766 | 85 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AP000907.4-201 | ENST00000604143 | 237 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | HTN1-205 | ENST00000610341 | 536 nt | APPRIS P1 TSL 1 (best) BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | ZNFX1-AS1_2.1-201 | ENST00000610973 | 93 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AL359757.2-201 | ENST00000624309 | 274 nt | BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | FGF7-202 | ENST00000560270 | 1688 nt | TSL 1 (best) BASIC | 1.79 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | Y_RNA.3-201 | ENST00000362331 | 103 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | SNORD50.1-201 | ENST00000362987 | 71 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU6-112P-201 | ENST00000363599 | 104 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU6-877P-201 | ENST00000383868 | 107 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU6-997P-201 | ENST00000384725 | 107 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | SNORD116-4-201 | ENST00000384733 | 96 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | MIR9-3-201 | ENST00000385084 | 90 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | U8.13-201 | ENST00000390842 | 128 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AL590632.1-201 | ENST00000424289 | 371 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | DAP3P1-201 | ENST00000441522 | 278 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC009237.7-201 | ENST00000447357 | 229 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC112492.4-201 | ENST00000456549 | 352 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RPL23AP75-201 | ENST00000491601 | 451 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC096733.1-201 | ENST00000503844 | 402 nt | TSL 3 BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC091435.1-201 | ENST00000505442 | 584 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | RNU2-34P-201 | ENST00000516534 | 121 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | SNORA44.1-201 | ENST00000517031 | 108 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC104581.2-201 | ENST00000572227 | 430 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | MIR4753-201 | ENST00000585119 | 83 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AC023043.2-201 | ENST00000589678 | 1026 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | SNRPGP20-201 | ENST00000604477 | 205 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AL589935.1-202 | ENST00000612512 | 393 nt | TSL 5 BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | U4.5-201 | ENST00000617137 | 123 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | SCARNA4-201 | ENST00000629045 | 128 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | AP000648.3-201 | ENST00000623539 | 4507 nt | BASIC | 1.78 | □□□□□ -2.12 | | |
| HOOK3 | Q86VS8 | MTND4P5-201 | ENST00000435821 | 1374 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | SAGE1-201 | ENST00000324447 | 2952 nt | APPRIS P2 TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | SNORA26.9-201 | ENST00000391322 | 122 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AL591806.2-201 | ENST00000433122 | 173 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC079354.2-201 | ENST00000453523 | 154 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC027575.1-201 | ENST00000481064 | 460 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC008834.1-201 | ENST00000511612 | 175 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR4285-201 | ENST00000581001 | 85 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR4524B-201 | ENST00000581569 | 115 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR3672-201 | ENST00000584290 | 82 nt | BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 1.77 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | BTLA-202 | ENST00000383680 | 726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | U8.10-201 | ENST00000384260 | 133 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR30A-201 | ENST00000385092 | 71 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AL358453.1-201 | ENST00000422522 | 250 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC099677.2-201 | ENST00000436385 | 175 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MTCO3P8-201 | ENST00000453691 | 755 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MTCO2P30-201 | ENST00000503662 | 364 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AP005120.1-201 | ENST00000579321 | 352 nt | TSL 3 BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | POLR3GP2-201 | ENST00000588366 | 668 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC069114.2-201 | ENST00000604699 | 304 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR6845-201 | ENST00000613182 | 61 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC090617.10-201 | ENST00000624308 | 134 nt | BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | HS1BP3-208 | ENST00000631166 | 78 nt | TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | GABRA2-209 | ENST00000510861 | 3411 nt | APPRIS P1 TSL 5 BASIC | 1.76 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | BX322639.1-202 | ENST00000423987 | 2213 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | Y_RNA.89-201 | ENST00000363031 | 102 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | Y_RNA.212-201 | ENST00000364177 | 102 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | Y_RNA.573-201 | ENST00000384763 | 105 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR517A-201 | ENST00000385001 | 87 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR549A-201 | ENST00000385268 | 96 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | MIR320B2-201 | ENST00000408479 | 138 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC004866.1-201 | ENST00000411748 | 78 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RPL21P111-201 | ENST00000418453 | 477 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AL513185.2-201 | ENST00000425543 | 193 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | NFU1P2-201 | ENST00000448700 | 469 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | LEKR1-205 | ENST00000477399 | 621 nt | TSL 2 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC110009.1-201 | ENST00000512965 | 451 nt | TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | SNORA25.15-201 | ENST00000516487 | 89 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC007991.3-201 | ENST00000517623 | 502 nt | TSL 4 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | LINC02398-201 | ENST00000536666 | 431 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RRN3P3-201 | ENST00000549207 | 578 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC126323.6-201 | ENST00000561701 | 451 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC025917.1-202 | ENST00000566344 | 635 nt | TSL 5 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | LINC01919-202 | ENST00000579506 | 384 nt | TSL 3 BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | AC009033.1-201 | ENST00000624279 | 431 nt | BASIC | 1.75 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 1.74 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RNU6-862P-201 | ENST00000362804 | 105 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | RNU4-12P-201 | ENST00000365233 | 139 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | SNORD116-11-201 | ENST00000383882 | 92 nt | BASIC | 1.74 | □□□□□ -2.13 | | |
| HOOK3 | Q86VS8 | Y_RNA.516-201 | ENST00000384541 | 124 nt | BASIC | 1.74 | □□□□□ -2.13 | | |