Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 BX322639.1-202ENST00000423987 2213 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 ZNF720P1-201ENST00000562403 1939 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.2-201ENST00000362330 96 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.142-201ENST00000363491 102 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 SNORA18.2-201ENST00000383865 132 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 RNU6-301P-201ENST00000384277 107 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 MIR320B2-201ENST00000408479 138 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2□□□□□ -2.09
NUP54Q7Z3B4 BX510359.4-201ENST00000423750 193 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 AC027124.2-201ENST00000428249 105 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
NUP54Q7Z3B4 MTND4P17-201ENST00000470444 350 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 TRBV12-1-201ENST00000479785 344 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2□□□□□ -2.09
NUP54Q7Z3B4 ATP5EP1-201ENST00000510257 156 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2□□□□□ -2.09
NUP54Q7Z3B4 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 RNA5SP54-201ENST00000516951 92 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 AC105029.1-201ENST00000520250 669 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 DEFB131C-201ENST00000528817 165 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
NUP54Q7Z3B4 AC104581.2-201ENST00000572227 430 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 SNRPGP20-201ENST00000604477 205 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 AC009229.3-201ENST00000608056 282 ntBASIC2□□□□□ -2.09
NUP54Q7Z3B4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
NUP54Q7Z3B4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU6-137P-201ENST00000363680 108 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 SNORD31B-201ENST00000364977 69 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU6-17P-201ENST00000384245 107 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.473-201ENST00000384333 102 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU6-18P-201ENST00000384527 107 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU7-14P-201ENST00000459331 62 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 TOMM22P6-201ENST00000465035 409 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RPL30P10-201ENST00000488148 337 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU7-175P-201ENST00000515915 61 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 CBX3P8-201ENST00000532412 525 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AC005899.2-201ENST00000584353 90 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AC016727.1-205ENST00000605437 569 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 PISRT1.1-201ENST00000616930 107 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 AL359697.1-201ENST00000624879 587 ntBASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NUP54Q7Z3B4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 RNU6-438P-201ENST00000365561 103 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 RNU4-14P-201ENST00000410858 122 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 USMG5P1-201ENST00000425964 177 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC004386.2-201ENST00000441858 148 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 MTND5P20-201ENST00000448677 143 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC091951.2-201ENST00000500762 203 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 RNU6-307P-201ENST00000516743 106 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 ANP32BP3-201ENST00000559213 706 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC113139.1-201ENST00000605049 239 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC025253.1-201ENST00000613623 543 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC092794.2-201ENST00000620933 563 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.98□□□□□ -2.09
NUP54Q7Z3B4 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.404-201ENST00000383978 102 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 SNORA70B-201ENST00000384210 135 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNY3P14-201ENST00000384309 102 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 SNORA12.2-201ENST00000391040 156 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 SNORA75.4-201ENST00000391278 119 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 AC009237.7-201ENST00000447357 229 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNA5SP57-201ENST00000459463 123 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RPL7P42-201ENST00000481005 679 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 RNU6-58P-201ENST00000517143 103 ntBASIC1.97□□□□□ -2.09
NUP54Q7Z3B4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms