Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Y_RNA.27-201ENST00000362540 103 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 SNORD46.1-201ENST00000364139 104 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNU6-280P-201ENST00000364145 104 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 SNORD14.1-201ENST00000365609 90 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNU6-245P-201ENST00000384020 107 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 Y_RNA.424-201ENST00000384063 103 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNY3P4-201ENST00000384428 101 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNU6-823P-201ENST00000391042 103 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNU2-63P-201ENST00000410792 194 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 MTCO3P19-201ENST00000415864 321 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 MTND2P23-201ENST00000422990 651 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 CBX3P6-201ENST00000430257 527 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 AC010469.2-201ENST00000496412 480 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 AC093852.1-201ENST00000503587 266 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 AC096725.1-201ENST00000514266 313 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 RNU6-965P-201ENST00000516721 96 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.28□□□□□ -2.04
SHFQ7M4L6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.28□□□□□ -2.04
SHFQ7M4L6 SNRPGP20-201ENST00000604477 205 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 AC116312.1-201ENST00000606841 314 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 TCL6_2.1-201ENST00000615162 119 ntBASIC2.28□□□□□ -2.04
SHFQ7M4L6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
SHFQ7M4L6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHFQ7M4L6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHFQ7M4L6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 Y_RNA.389-201ENST00000383924 113 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 RNU6-26P-201ENST00000383985 107 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 MIR329-1-201ENST00000385028 80 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 MIR1294-201ENST00000408503 142 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC004386.2-201ENST00000441858 148 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 RNU6-327P-201ENST00000516270 127 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 RNU2-44P-201ENST00000516795 194 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC022616.4-201ENST00000522985 181 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC113195.1-201ENST00000579952 141 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 AL355297.2-201ENST00000604792 129 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 AC010999.1-201ENST00000611856 324 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 U6.92-201ENST00000636464 89 ntBASIC2.27□□□□□ -2.05
SHFQ7M4L6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SHFQ7M4L6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHFQ7M4L6 RNU1-76P-201ENST00000362903 159 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 Y_RNA.455-201ENST00000384230 98 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 RNU6-1145P-201ENST00000384246 107 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 SNORA51.11-201ENST00000384442 131 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 MIR320B2-201ENST00000408479 138 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 RNU2-32P-201ENST00000411193 191 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 AC010095.1-201ENST00000443543 144 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 RPS3AP12-201ENST00000443616 753 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 AC091179.3-201ENST00000474761 144 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.26□□□□□ -2.05
SHFQ7M4L6 RNU6-764P-201ENST00000516396 105 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 RN7SKP49-201ENST00000516675 260 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 Y_RNA.721-201ENST00000517207 102 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.26□□□□□ -2.05
SHFQ7M4L6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.26□□□□□ -2.05
SHFQ7M4L6 MIR5006-201ENST00000583027 110 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 ELOCP29-201ENST00000588193 334 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 MZT1P2-201ENST00000604387 248 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 AC124312.5-201ENST00000604451 268 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 MIR1248-201ENST00000629190 106 ntBASIC2.26□□□□□ -2.05
SHFQ7M4L6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHFQ7M4L6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SHFQ7M4L6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.26□□□□□ -2.05
SHFQ7M4L6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 Y_RNA.145-201ENST00000363527 102 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 RNU6-546P-201ENST00000383991 107 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 RNU6-101P-201ENST00000410323 104 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 RNU2-48P-201ENST00000410694 191 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 Z82209.1-201ENST00000422141 2135 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 AC105272.1-201ENST00000438604 198 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 AC009237.7-201ENST00000447357 229 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 AC018868.1-201ENST00000491307 315 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 AC022616.8-201ENST00000533569 253 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 PART1_1.1-201ENST00000611761 217 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 AL357075.2-201ENST00000614906 189 ntBASIC2.25□□□□□ -2.05
SHFQ7M4L6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.25□□□□□ -2.05
SHFQ7M4L6 RNU1-62P-201ENST00000362599 164 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RNU6-859P-201ENST00000362728 107 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 Y_RNA.153-201ENST00000363615 91 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 Y_RNA.179-201ENST00000363844 90 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RNU6-234P-201ENST00000365229 104 ntBASIC2.24□□□□□ -2.05
SHFQ7M4L6 RNU6-793P-201ENST00000384233 104 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms