Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AL135790.2-201ENST00000437701 267 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1037P-201ENST00000459571 107 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC022447.4-201ENST00000504053 364 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC091885.1-201ENST00000506658 268 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC079140.5-201ENST00000507882 310 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC093259.1-201ENST00000509755 300 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC005741.1-201ENST00000511094 432 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC025465.4-201ENST00000513422 638 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 MRPS36P4-201ENST00000534436 298 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC018630.3-201ENST00000542637 96 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 ZNF519P2-201ENST00000557032 169 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 EIF1P4-201ENST00000572664 335 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 DISC2.1-201ENST00000612827 205 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 AP000560.1-201ENST00000624150 1937 ntBASIC1.06□□□□□ -2.24
SMARCD3Q6STE5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 RNY3P3-201ENST00000363816 102 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 SNORD114-6-201ENST00000364393 72 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 RNU4-12P-201ENST00000365233 139 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 EIF4E2P1-201ENST00000393781 255 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 RNU6-325P-201ENST00000411132 105 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AP000275.1-201ENST00000411943 390 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AL590556.1-201ENST00000423231 483 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AL359672.1-201ENST00000442302 409 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AC112492.4-201ENST00000456549 352 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 RNU7-187P-201ENST00000458985 68 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 HMGN2P26-201ENST00000463169 339 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AC010409.1-201ENST00000487382 476 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 RPL36AP21-201ENST00000490372 323 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 ATP5EP1-201ENST00000510257 156 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 SNORA31.17-201ENST00000516953 127 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 SCOCP1-201ENST00000554676 349 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 MIR3136-201ENST00000583498 78 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 Z98751.3-201ENST00000604447 521 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 AC064807.4-201ENST00000607201 407 ntBASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SMARCD3Q6STE5 CBX3P1-201ENST00000325243 554 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.123-201ENST00000363338 102 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1215P-201ENST00000384441 102 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 MIR487A-201ENST00000385009 80 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 SNORA12.2-201ENST00000391040 156 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 SNORA26.3-201ENST00000391119 136 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 MTCYBP2-201ENST00000407745 171 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1148P-201ENST00000410992 104 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 CBX3P6-201ENST00000430257 527 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 USP9YP28-201ENST00000435142 589 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 HMGN2P18-201ENST00000450680 270 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 RNU7-66P-201ENST00000459469 62 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC092989.1-201ENST00000481235 277 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC016632.1-201ENST00000503994 196 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC091435.1-201ENST00000505442 584 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC084364.2-201ENST00000546924 395 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 MIR3923-201ENST00000579521 83 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 MIR3976-201ENST00000606807 139 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 PCGEM1.1-201ENST00000613431 131 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC090617.10-201ENST00000624308 134 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 AC121333.1-201ENST00000567488 2709 ntBASIC1.04□□□□□ -2.24
SMARCD3Q6STE5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC092268.1-201ENST00000342691 405 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-227P-201ENST00000362865 103 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.151-201ENST00000363566 112 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNY4P14-201ENST00000363656 96 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 SNORD113-7-201ENST00000363762 77 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-271P-201ENST00000363858 105 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.402-201ENST00000383972 102 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-26P-201ENST00000383985 107 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 SNORA29-201ENST00000384183 140 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 Y_RNA.450-201ENST00000384198 113 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MIR181A1-201ENST00000385026 110 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1106P-201ENST00000390845 107 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MIR208B-201ENST00000401172 77 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC004965.1-201ENST00000413033 213 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 ARL5AP1-201ENST00000418991 388 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms