Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 UBL5P3-201ENST00000475112 231 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 RNU7-175P-201ENST00000515915 61 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 MIR4753-201ENST00000585119 83 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 AC099654.5-201ENST00000636479 350 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 AC099654.14-201ENST00000638599 341 ntBASIC2.2□□□□□ -2.06
SNX30Q5VWJ9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RNU6-601P-201ENST00000384540 107 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RNU6-541P-201ENST00000384709 110 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 HMGB1P18-201ENST00000438801 619 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RBMX2P4-201ENST00000441256 376 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 MTND3P10-201ENST00000450967 341 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 PMCHL2-203ENST00000457791 237 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 FO393415.2-201ENST00000480085 343 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RNU6-307P-201ENST00000516743 106 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.708-201ENST00000516950 96 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 AL590705.4-201ENST00000532209 134 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RBM11P1-201ENST00000604951 799 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.15-201ENST00000611544 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.16-201ENST00000613119 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.12-201ENST00000613778 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.20-201ENST00000613956 192 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.9-201ENST00000615427 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.11-201ENST00000616345 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.2-201ENST00000616535 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 AC022306.2-201ENST00000617563 647 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.3-201ENST00000617785 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.19-201ENST00000618602 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 RNU2-1-201ENST00000618664 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.6-201ENST00000619225 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.5-201ENST00000619465 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 U2.10-201ENST00000620268 191 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 DUXAP9-208ENST00000622815 614 ntBASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX30Q5VWJ9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AC098614.3-201ENST00000438957 440 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 RNU2-34P-201ENST00000516534 121 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AP005660.1-201ENST00000522972 293 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AC010928.2-201ENST00000588017 287 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL158827.2-201ENST00000602494 330 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AC005034.5-201ENST00000604219 466 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 PISRT1.1-201ENST00000616930 107 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL691447.3-201ENST00000635020 330 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 ZNF702P-202ENST00000434269 1966 ntBASIC2.18□□□□□ -2.06
SNX30Q5VWJ9 ZNF204P-201ENST00000416749 2397 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 RNU6-595P-201ENST00000363944 107 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 RNA5SP493-201ENST00000364115 91 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.339-201ENST00000365325 102 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.533-201ENST00000384596 114 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 MIR1283-1-201ENST00000408494 87 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC139712.2-201ENST00000424302 339 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC026782.1-201ENST00000512952 449 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC134698.4-201ENST00000523451 826 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 DEFB131C-201ENST00000528817 165 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC104581.2-201ENST00000572227 430 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC005899.2-201ENST00000584353 90 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC005786.1-201ENST00000588553 154 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX30Q5VWJ9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.2-201ENST00000362330 96 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 RNU6-280P-201ENST00000364145 104 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 RNU6-17P-201ENST00000384245 107 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 RNU6-18P-201ENST00000384527 107 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 Y_RNA.594-201ENST00000410373 140 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 RNU6-1050P-201ENST00000410388 107 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 Z82188.1-201ENST00000436709 154 ntBASIC2.16□□□□□ -2.06
SNX30Q5VWJ9 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms