Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 RNA5SP374-201ENST00000362939 125 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 RNU6-727P-201ENST00000363592 107 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.326-201ENST00000365176 113 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 SNORD14.1-201ENST00000365609 90 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.422-201ENST00000384054 114 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 MIR586-201ENST00000385035 97 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 MIR1283-1-201ENST00000408494 87 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 SNORD12B-201ENST00000410433 91 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 PCNPP5-201ENST00000452246 481 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 AL137159.1-201ENST00000452808 512 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 SNORA9.3-201ENST00000516383 129 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 MIR4753-201ENST00000585119 83 ntBASIC2.66□□□□□ -1.98
RNF220Q5VTB9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
RNF220Q5VTB9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.65□□□□□ -1.98
RNF220Q5VTB9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.65□□□□□ -1.98
RNF220Q5VTB9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 SNORA67.2-201ENST00000384300 149 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 EDDM3CP-201ENST00000415977 425 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC016925.1-201ENST00000458303 298 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC114982.1-201ENST00000469402 321 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.721-201ENST00000517207 102 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC025754.2-201ENST00000606491 432 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 AC040896.1-201ENST00000613819 479 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RNF220Q5VTB9 MTND4P1-201ENST00000457501 1466 ntBASIC2.65□□□□□ -1.99
RNF220Q5VTB9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 RNU6-639P-201ENST00000384074 107 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 RNU6-708P-201ENST00000384217 107 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 SNORD78.2-201ENST00000391076 69 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.645-201ENST00000391229 102 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC123900.1-201ENST00000420390 96 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC074290.1-201ENST00000448883 135 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC245102.2-201ENST00000448956 180 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 BX510359.1-201ENST00000456973 237 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 SNORA31.11-201ENST00000516528 139 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC040926.1-201ENST00000530195 238 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 AC008873.1-201ENST00000625051 138 ntBASIC2.64□□□□□ -1.99
RNF220Q5VTB9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RNF220Q5VTB9 MIR422A-201ENST00000362286 90 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 SNORD46.1-201ENST00000364139 104 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 SNORA51.11-201ENST00000384442 131 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 MIR23A-201ENST00000385245 73 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 SNORA48.5-201ENST00000391143 135 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 UQCRBP2-201ENST00000447827 297 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 NDUFB4P10-201ENST00000452541 359 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AC074133.1-201ENST00000515696 183 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AC022616.4-201ENST00000522985 181 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AC104695.3-201ENST00000604052 296 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 AL078596.1-201ENST00000624856 447 ntBASIC2.63□□□□□ -1.99
RNF220Q5VTB9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF220Q5VTB9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 RNU4-50P-201ENST00000364361 141 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 SNORD87-201ENST00000364849 89 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 RNA5SP504-201ENST00000410676 117 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 SDAD1P3-201ENST00000427380 333 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 FCF1P4-201ENST00000448326 183 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 HMGN2P9-201ENST00000476875 229 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AC233702.2-202ENST00000562547 291 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms