Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.41□□□□□ -2.02
RUNDC3AQ59EK9 RNA5SP361-201ENST00000362686 118 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 SNORA38-201ENST00000363946 132 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-611P-201ENST00000384276 104 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 MIR1302-11-201ENST00000408051 138 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 MIR1302-9-201ENST00000408365 138 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 MIR1302-10-201ENST00000408734 138 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.605-201ENST00000410577 105 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC114482.1-201ENST00000418010 247 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 RPS23P5-201ENST00000495419 428 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC022868.1-201ENST00000517767 391 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 MIR1302-2-201ENST00000607096 138 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 SNORD58B-201ENST00000607313 66 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC093732.2-201ENST00000607950 274 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 AC005296.1-201ENST00000616145 209 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 ZNF72P-201ENST00000425869 1908 ntBASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.28-201ENST00000362554 111 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-280P-201ENST00000364145 104 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-318P-201ENST00000384283 103 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 MIR320B2-201ENST00000408479 138 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNA5SP504-201ENST00000410676 117 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNU7-14P-201ENST00000459331 62 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 AC091179.3-201ENST00000474761 144 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-991P-201ENST00000516168 107 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 CYCSP26-201ENST00000534107 320 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 EIF4BP1-201ENST00000554881 351 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 ANP32BP3-201ENST00000559213 706 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 AC006600.1-201ENST00000572529 153 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 U2.1-201ENST00000618978 145 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 AC243829.7-201ENST00000633081 225 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 AL606534.2-204ENST00000635008 178 ntBASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RUNDC3AQ59EK9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.39-201ENST00000362620 98 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-1301P-201ENST00000362724 104 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.80-201ENST00000362996 102 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 SNORA22B-201ENST00000383876 138 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 AC005534.2-201ENST00000431047 433 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 HMGN2P18-201ENST00000450680 270 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 AL163540.1-201ENST00000485382 386 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-344P-201ENST00000516635 111 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 RNA5SP490-201ENST00000517141 136 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 AC233702.2-202ENST00000562547 291 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 MIR7106-201ENST00000612419 65 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 AC022202.1-201ENST00000613515 211 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
RUNDC3AQ59EK9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 RNU1-62P-201ENST00000362599 164 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-879P-201ENST00000364328 108 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-708P-201ENST00000384217 107 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 MIR329-1-201ENST00000385028 80 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AL357139.1-201ENST00000407792 426 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AL049873.1-201ENST00000480540 376 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AC093259.1-201ENST00000509755 300 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-911P-201ENST00000516523 104 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 MIR2355-201ENST00000517199 87 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AP002770.2-201ENST00000543613 532 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 MIR5188-201ENST00000583467 113 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 VN1R91P-201ENST00000594377 169 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 MZT1P2-201ENST00000604387 248 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AL033523.1-201ENST00000605153 153 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AC010999.1-201ENST00000611856 324 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
RUNDC3AQ59EK9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms