Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AC006445.1-201ENST00000491925 405 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 MIR449C-201ENST00000516047 92 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 MIR2114-201ENST00000516645 80 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 RNU7-116P-201ENST00000516940 62 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 AC127455.1-201ENST00000565496 145 ntBASIC4.19□□□□□ -1.74
NR1H3Q13133 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NR1H3Q13133 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NR1H3Q13133 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.18□□□□□ -1.74
NR1H3Q13133 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NR1H3Q13133 SNORD14D-201ENST00000384390 87 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 MIR670-201ENST00000390142 98 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 RNA5SP354-201ENST00000391247 136 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 SNORA75.5-201ENST00000391291 81 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 RNU6-1077P-201ENST00000410506 102 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 Y_RNA.622-201ENST00000411091 108 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 RPL23AP54-201ENST00000495129 419 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 AC010598.1-201ENST00000510378 103 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.18□□□□□ -1.74
NR1H3Q13133 RNA5SP112-201ENST00000515937 99 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 RNA5SP143-201ENST00000516936 115 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.18□□□□□ -1.74
NR1H3Q13133 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.18□□□□□ -1.74
NR1H3Q13133 AC005972.2-201ENST00000604690 348 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 U7.2-201ENST00000607576 63 ntBASIC4.18□□□□□ -1.74
NR1H3Q13133 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NR1H3Q13133 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NR1H3Q13133 RNU6-834P-201ENST00000362367 110 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 RPL36AP21-201ENST00000490372 323 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 AL031274.2-201ENST00000599419 203 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.17□□□□□ -1.74
NR1H3Q13133 MIR6868-201ENST00000611215 58 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 MIR6075-201ENST00000620782 95 ntBASIC4.17□□□□□ -1.74
NR1H3Q13133 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
NR1H3Q13133 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.16□□□□□ -1.74
NR1H3Q13133 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H3Q13133 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.16□□□□□ -1.74
NR1H3Q13133 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.16□□□□□ -1.74
NR1H3Q13133 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H3Q13133 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 RNU6-57P-201ENST00000411348 103 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.16□□□□□ -1.74
NR1H3Q13133 SNORD65B-201ENST00000459126 73 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 RNU6-437P-201ENST00000459408 95 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 CYCSP30-201ENST00000546447 172 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 AC008739.3-201ENST00000603262 127 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 CR392039.5-201ENST00000623201 510 ntBASIC4.16□□□□□ -1.74
NR1H3Q13133 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
NR1H3Q13133 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H3Q13133 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NR1H3Q13133 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H3Q13133 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H3Q13133 AL356292.1-201ENST00000283110 373 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNA5SP295-201ENST00000362655 121 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 SNORD45.3-201ENST00000363836 72 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNU6-1056P-201ENST00000383996 107 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNU6-975P-201ENST00000384296 105 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 AL512604.1-201ENST00000404812 257 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 SNORA57.3-201ENST00000411095 141 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.15□□□□□ -1.75
NR1H3Q13133 AL133547.1-201ENST00000448546 220 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNU6-221P-201ENST00000459541 99 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 RNU6-659P-201ENST00000516454 104 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 AC090142.3-201ENST00000519012 385 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 AC027419.1-201ENST00000522976 328 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.15□□□□□ -1.75
NR1H3Q13133 AC244205.2-202ENST00000635781 342 ntBASIC4.15□□□□□ -1.75
NR1H3Q13133 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H3Q13133 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NR1H3Q13133 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
NR1H3Q13133 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NR1H3Q13133 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NR1H3Q13133 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NR1H3Q13133 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NR1H3Q13133 RNU6-234P-201ENST00000365229 104 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 RNA5SP496-201ENST00000391240 109 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 RNU2-52P-201ENST00000410680 190 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AL135786.1-201ENST00000415892 214 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.14□□□□□ -1.75
NR1H3Q13133 AL500522.2-201ENST00000448562 343 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.14□□□□□ -1.75
NR1H3Q13133 SNRPGP3-201ENST00000469405 227 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 RNA5SP20-201ENST00000515976 84 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 RN7SKP179-201ENST00000516126 217 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.14□□□□□ -1.75
NR1H3Q13133 MIR4444-1-201ENST00000581696 74 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.14□□□□□ -1.75
NR1H3Q13133 MIR4444-2-201ENST00000584390 74 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 AC007256.1-201ENST00000392253 2765 ntBASIC4.14□□□□□ -1.75
NR1H3Q13133 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
NR1H3Q13133 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NR1H3Q13133 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.14□□□□□ -1.75
NR1H3Q13133 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.14□□□□□ -1.75
NR1H3Q13133 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.14□□□□□ -1.75
NR1H3Q13133 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NR1H3Q13133 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NR1H3Q13133 RNU6-486P-201ENST00000363116 107 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms