Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MIR200C-201ENST00000384980 68 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 U3.37-201ENST00000408528 213 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 RNA5SP127-201ENST00000411051 133 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.42□□□□□ -1.7
NFX1Q12986 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.42□□□□□ -1.7
NFX1Q12986 RNU7-61P-201ENST00000515897 61 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.42□□□□□ -1.7
NFX1Q12986 DEFB131E-201ENST00000532329 154 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 AC020895.1-201ENST00000595362 272 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 FTX_3.1-201ENST00000610451 147 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 AL138880.2-201ENST00000616214 239 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 U6.99-201ENST00000637524 83 ntBASIC4.42□□□□□ -1.7
NFX1Q12986 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NFX1Q12986 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NFX1Q12986 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFX1Q12986 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NFX1Q12986 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFX1Q12986 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.41□□□□□ -1.7
NFX1Q12986 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNU6-799P-201ENST00000363567 107 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNU6-414P-201ENST00000363705 104 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNU1-133P-201ENST00000364867 167 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 SNORA18.3-201ENST00000384122 132 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NFX1Q12986 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.41□□□□□ -1.7
NFX1Q12986 AC005300.1-201ENST00000428401 373 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.41□□□□□ -1.7
NFX1Q12986 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
NFX1Q12986 HMGN2P7-201ENST00000456186 273 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNA5SP57-201ENST00000459463 123 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RPL31P41-201ENST00000477967 372 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AC006517.1-201ENST00000480485 328 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNA5SP236-201ENST00000516169 116 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AP004607.1-201ENST00000524456 203 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 MIR4444-1-201ENST00000581696 74 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 MIR4444-2-201ENST00000584390 74 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AC097639.2-201ENST00000603159 172 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AC025754.2-201ENST00000606491 432 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AC012531.5-201ENST00000611375 151 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 U7.3-201ENST00000616123 62 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 MIR7702-201ENST00000621931 59 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.41□□□□□ -1.7
NFX1Q12986 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.41□□□□□ -1.7
NFX1Q12986 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.41□□□□□ -1.7
NFX1Q12986 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.41□□□□□ -1.7
NFX1Q12986 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NFX1Q12986 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NFX1Q12986 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NFX1Q12986 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NFX1Q12986 Y_RNA.366-201ENST00000365540 102 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 Y_RNA.415-201ENST00000384012 112 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 MIR30B-201ENST00000384850 88 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 RNU2-70P-201ENST00000410718 179 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 RNA5SP31-201ENST00000411144 127 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.4□□□□□ -1.71
NFX1Q12986 RNA5SP310-201ENST00000459084 116 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.4□□□□□ -1.71
NFX1Q12986 RNU6-267P-201ENST00000516714 103 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.4□□□□□ -1.71
NFX1Q12986 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.4□□□□□ -1.71
NFX1Q12986 AL356575.1-201ENST00000603008 283 ntBASIC4.4□□□□□ -1.71
NFX1Q12986 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.4□□□□□ -1.71
NFX1Q12986 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.4□□□□□ -1.71
NFX1Q12986 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
NFX1Q12986 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NFX1Q12986 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NFX1Q12986 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NFX1Q12986 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.39□□□□□ -1.71
NFX1Q12986 SNORD74.4-201ENST00000364129 80 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 Y_RNA.213-201ENST00000364178 111 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 Y_RNA.361-201ENST00000365515 120 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NFX1Q12986 RNU4-37P-201ENST00000410214 84 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NFX1Q12986 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.39□□□□□ -1.71
NFX1Q12986 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 PPIAP15-201ENST00000479662 484 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 RN7SL323P-201ENST00000494712 295 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AC025445.1-201ENST00000502728 300 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AC025554.1-201ENST00000505641 188 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AC114801.3-201ENST00000510231 177 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 RNU6-162P-201ENST00000516228 103 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NFX1Q12986 AC005972.2-201ENST00000604690 348 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AC091167.4-201ENST00000605079 184 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.39□□□□□ -1.71
NFX1Q12986 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.39□□□□□ -1.71
NFX1Q12986 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFX1Q12986 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NFX1Q12986 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NFX1Q12986 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NFX1Q12986 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NFX1Q12986 Y_RNA.91-201ENST00000363042 107 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 Y_RNA.634-201ENST00000364811 113 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 AL117342.1-201ENST00000404861 406 ntBASIC4.38□□□□□ -1.71
NFX1Q12986 RN7SKP61-201ENST00000410642 295 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms