Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC069114.2-201ENST00000604699 304 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 AC097065.2-201ENST00000608159 533 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 AC137590.2-201ENST00000619709 240 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 WWP1P1-201ENST00000466609 2769 ntBASIC1.44□□□□□ -2.18
RAB40BQ12829 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.43□□□□□ -2.18
RAB40BQ12829 MIR424-201ENST00000362227 98 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RNU6-862P-201ENST00000362804 105 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 Y_RNA.402-201ENST00000383972 102 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RNU6-95P-201ENST00000384697 107 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 SNORA26.9-201ENST00000391322 122 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 MIR1289-2-201ENST00000408360 111 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 MIR320B2-201ENST00000408479 138 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 MTCO1P21-201ENST00000416634 589 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AL590632.1-201ENST00000424289 371 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.43□□□□□ -2.18
RAB40BQ12829 AC099677.2-201ENST00000436385 175 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RNU7-66P-201ENST00000459469 62 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RPL23AP75-201ENST00000491601 451 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.43□□□□□ -2.18
RAB40BQ12829 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.43□□□□□ -2.18
RAB40BQ12829 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AC067942.3-201ENST00000512025 362 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RNU6-256P-201ENST00000516747 97 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 RRN3P3-201ENST00000549207 578 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AC023043.2-201ENST00000589678 1026 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 SNRPGP20-201ENST00000604477 205 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RAB40BQ12829 AL138726.1-201ENST00000614873 333 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AC084768.2-201ENST00000622736 221 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 AC024614.3-201ENST00000637860 256 ntBASIC1.43□□□□□ -2.18
RAB40BQ12829 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
RAB40BQ12829 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
RAB40BQ12829 RNU6-296P-201ENST00000384608 107 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RAB40BQ12829 SNORA40.18-201ENST00000391200 128 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.42□□□□□ -2.18
RAB40BQ12829 ZNF885P-201ENST00000420174 1098 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.42□□□□□ -2.18
RAB40BQ12829 AC007677.1-201ENST00000445757 515 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC007215.1-201ENST00000464893 276 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC114982.1-201ENST00000469402 321 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC027575.1-201ENST00000481064 460 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC116337.1-201ENST00000509680 687 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 RNU2-34P-201ENST00000516534 121 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.42□□□□□ -2.18
RAB40BQ12829 POLR3GP2-201ENST00000588366 668 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AC011494.1-201ENST00000596454 237 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.42□□□□□ -2.18
RAB40BQ12829 MIR8074-201ENST00000615081 81 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.42□□□□□ -2.18
RAB40BQ12829 SCARNA4-201ENST00000629045 128 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.42□□□□□ -2.18
RAB40BQ12829 MTND4P5-201ENST00000435821 1374 ntBASIC1.42□□□□□ -2.18
RAB40BQ12829 Y_RNA.9-201ENST00000362354 101 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 SNORD50.1-201ENST00000362987 71 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 Y_RNA.100-201ENST00000363141 102 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 RNU1-96P-201ENST00000364163 162 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 Y_RNA.414-201ENST00000384011 101 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR520A-201ENST00000384862 85 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR487A-201ENST00000385009 80 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 RNU6-373P-201ENST00000411247 98 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 AC004866.1-201ENST00000411748 78 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 EBAG9P1-201ENST00000418955 543 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.41□□□□□ -2.18
RAB40BQ12829 AL358453.1-201ENST00000422522 250 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 NFU1P2-201ENST00000448700 469 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.41□□□□□ -2.18
RAB40BQ12829 MTND1P11-201ENST00000456661 876 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 snoU13.30-201ENST00000458951 104 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MTCO2P30-201ENST00000503662 364 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 HMGN1P13-201ENST00000505795 138 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 AC025465.3-201ENST00000510570 311 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR6715A-201ENST00000615929 79 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 MIR7843-201ENST00000622274 79 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 ZNF204P-201ENST00000416749 2397 ntBASIC1.41□□□□□ -2.18
RAB40BQ12829 BX322639.1-202ENST00000423987 2213 ntBASIC1.4□□□□□ -2.18
RAB40BQ12829 RNU6-414P-201ENST00000363705 104 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 RNU6-1305P-201ENST00000364353 104 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 RNU4-42P-201ENST00000364738 142 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 Y_RNA.318-201ENST00000365131 97 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 Y_RNA.554-201ENST00000384672 102 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 MIR517A-201ENST00000385001 87 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC007098.1-201ENST00000420122 367 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC060773.1-201ENST00000421698 310 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 DAP3P1-201ENST00000441522 278 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC074290.1-201ENST00000448883 135 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC016717.1-201ENST00000448918 286 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB40BQ12829 AC079354.2-201ENST00000453523 154 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC005908.1-201ENST00000468701 347 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 HMGN2P9-201ENST00000476875 229 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms