Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC096644.4-201ENST00000563417 2912 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSRP1Q08945 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.87
SSRP1Q08945 Y_RNA.483-201ENST00000384380 101 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 MT-TG-201ENST00000387429 68 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 AL033519.2-201ENST00000403958 392 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 RNU2-20P-201ENST00000410425 191 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 TRBVB-201ENST00000477100 408 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 AC098869.1-201ENST00000481627 292 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 RN7SL283P-201ENST00000489055 303 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.34□□□□□ -1.87
SSRP1Q08945 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.34□□□□□ -1.87
SSRP1Q08945 AC022080.3-201ENST00000544433 482 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 SNORD11B-201ENST00000607707 90 ntBASIC3.34□□□□□ -1.87
SSRP1Q08945 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SSRP1Q08945 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSRP1Q08945 RNU6-626P-201ENST00000363354 107 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 RNU6-961P-201ENST00000363893 105 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AL451074.5-201ENST00000415894 435 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.33□□□□□ -1.88
SSRP1Q08945 CBX3P6-201ENST00000430257 527 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.33□□□□□ -1.88
SSRP1Q08945 RNU6-625P-201ENST00000459412 107 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 S100A11P2-201ENST00000467589 312 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
SSRP1Q08945 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
SSRP1Q08945 AK6P2-201ENST00000549020 471 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AC018448.1-201ENST00000552843 316 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AC110588.1-201ENST00000559699 137 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.33□□□□□ -1.88
SSRP1Q08945 MIR4423-201ENST00000580922 80 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
SSRP1Q08945 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSRP1Q08945 AC008264.2-201ENST00000610193 3731 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 Y_RNA.84-201ENST00000363011 104 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 snoU2_19.2-201ENST00000363024 80 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 Y_RNA.230-201ENST00000364348 109 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 SNORA51.4-201ENST00000364993 124 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 RNU6-20P-201ENST00000384106 107 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 MIR1294-201ENST00000408503 142 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 RNU5A-5P-201ENST00000411054 116 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 AC090515.1-201ENST00000465295 476 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 AL049873.1-201ENST00000480540 376 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.32□□□□□ -1.88
SSRP1Q08945 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.32□□□□□ -1.88
SSRP1Q08945 AC023043.3-201ENST00000593113 385 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 MIR5739-201ENST00000619803 80 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 SCARNA15.3-201ENST00000626315 122 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 SCARNA4.1-201ENST00000628597 123 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.32□□□□□ -1.88
SSRP1Q08945 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.32□□□□□ -1.88
SSRP1Q08945 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSRP1Q08945 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSRP1Q08945 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSRP1Q08945 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SSRP1Q08945 SNORD113-8-201ENST00000363497 74 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 Y_RNA.188-201ENST00000363952 111 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 RNU6-944P-201ENST00000364023 107 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 Y_RNA.498-201ENST00000384460 102 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 Y_RNA.518-201ENST00000384552 113 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 MIR215-201ENST00000384858 110 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 Y_RNA.581-201ENST00000391017 97 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 FO393413.1-201ENST00000402892 195 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 RNU6-1203P-201ENST00000410703 110 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AL390729.2-201ENST00000416137 156 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 ARL5AP4-201ENST00000430731 512 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 RPS29P6-201ENST00000438196 145 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AP001486.1-201ENST00000463339 476 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 RPS29P26-201ENST00000477483 171 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AC018630.3-201ENST00000542637 96 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.31□□□□□ -1.88
SSRP1Q08945 MIR3616-201ENST00000584070 92 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
SSRP1Q08945 AC005176.2-201ENST00000596933 147 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.31□□□□□ -1.88
SSRP1Q08945 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.31□□□□□ -1.88
SSRP1Q08945 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.31□□□□□ -1.88
SSRP1Q08945 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
SSRP1Q08945 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSRP1Q08945 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSRP1Q08945 SNORD81.1-201ENST00000363064 77 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 RNU6-461P-201ENST00000364195 107 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 Y_RNA.570-201ENST00000384750 101 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 Y_RNA.602-201ENST00000410535 92 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 ELOCP21-201ENST00000412558 336 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms