Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL117342.1-201ENST00000404861 406 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 RNU2-7P-201ENST00000410794 178 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AL445305.1-201ENST00000432577 575 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 MTATP6P13-201ENST00000438531 667 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.74□□□□□ -2.13
SCN1BQ07699 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.74□□□□□ -2.13
SCN1BQ07699 RNA5SP437-201ENST00000517249 129 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AC026464.5-201ENST00000562497 722 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.74□□□□□ -2.13
SCN1BQ07699 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.74□□□□□ -2.13
SCN1BQ07699 AC016925.2-201ENST00000605108 242 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 MIR8074-201ENST00000615081 81 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 MIR6852-201ENST00000621699 66 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 AC006001.4-201ENST00000622243 395 ntBASIC1.74□□□□□ -2.13
SCN1BQ07699 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN1BQ07699 AC010615.1-201ENST00000594254 1764 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 SNORD115-32-201ENST00000364079 82 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 Y_RNA.319-201ENST00000365138 92 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN1BQ07699 MTND4LP16-201ENST00000440828 295 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AC074290.1-201ENST00000448883 135 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN1BQ07699 RPS29P25-201ENST00000481709 171 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AC025465.3-201ENST00000510570 311 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 RNU6-1088P-201ENST00000516850 104 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 RNA5SP54-201ENST00000516951 92 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN1BQ07699 AP003465.2-201ENST00000602571 373 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AC093913.1-201ENST00000614178 329 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 AL078596.1-201ENST00000624856 447 ntBASIC1.73□□□□□ -2.13
SCN1BQ07699 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SCN1BQ07699 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SCN1BQ07699 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN1BQ07699 RNU6-414P-201ENST00000363705 104 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 SNORD115-8-201ENST00000363856 82 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 RNU6-1019P-201ENST00000364424 107 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 SNORD115-38-201ENST00000365037 82 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 XGY1-201ENST00000381172 446 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 RNU6-1013P-201ENST00000384180 107 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 MIR153-2-201ENST00000385225 87 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 RNU6-57P-201ENST00000411348 103 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN1BQ07699 UBE2V1P8-201ENST00000437166 265 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 HMGN1P13-201ENST00000505795 138 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN1BQ07699 RNU6-344P-201ENST00000516635 111 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 CBX3P4-201ENST00000538909 354 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 AC084364.2-201ENST00000546924 395 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN1BQ07699 AL353149.1-201ENST00000610667 244 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 AC008873.1-201ENST00000625051 138 ntBASIC1.72□□□□□ -2.13
SCN1BQ07699 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN1BQ07699 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN1BQ07699 SNORA64-201ENST00000384674 134 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SCN1BQ07699 AL023284.1-201ENST00000403956 276 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN1BQ07699 AL135786.1-201ENST00000415892 214 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 Z98742.3-201ENST00000418637 326 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 EBAG9P1-201ENST00000418955 543 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 CST2P1-201ENST00000425770 87 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.71□□□□□ -2.14
SCN1BQ07699 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCN1BQ07699 AC112492.4-201ENST00000456549 352 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 RNU7-57P-201ENST00000459540 60 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 RPL30P10-201ENST00000488148 337 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 RNU6-58P-201ENST00000517143 103 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 RNA5SP454-201ENST00000517231 127 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN1BQ07699 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.71□□□□□ -2.14
SCN1BQ07699 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN1BQ07699 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 MIR4672-201ENST00000583126 81 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 MIR338-201ENST00000636369 67 ntBASIC1.71□□□□□ -2.14
SCN1BQ07699 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCN1BQ07699 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SCN1BQ07699 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN1BQ07699 MIR126-201ENST00000362291 85 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 Y_RNA.6-201ENST00000362350 114 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 SNORA33-201ENST00000363664 130 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 RNU6-338P-201ENST00000383888 105 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 RNU6-245P-201ENST00000384020 107 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 SNORA67.2-201ENST00000384300 149 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 MIR548B-201ENST00000385247 97 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 RNA5SP504-201ENST00000410676 117 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN1BQ07699 RPL30P16-201ENST00000419341 429 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 AL356320.1-201ENST00000429616 163 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN1BQ07699 HMGN2P34-201ENST00000437647 269 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 MTND1P34-201ENST00000438556 671 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms