Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RN7SKP164-201ENST00000516138 266 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 RNA5SP470-201ENST00000516463 106 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 VN1R83P-201ENST00000595685 445 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 AC078795.2-201ENST00000602835 1252 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 AC091304.9-201ENST00000612091 226 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 AC098679.4-201ENST00000624241 654 ntBASIC-1.33□□□□□ -2.62
TFF3Q07654 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.33□□□□□ -2.62
TFF3Q07654 RNU6-369P-201ENST00000362515 102 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AC010385.1-201ENST00000412374 256 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.34□□□□□ -2.62
TFF3Q07654 AC092427.1-201ENST00000439177 601 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AC079354.2-201ENST00000453523 154 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.34□□□□□ -2.62
TFF3Q07654 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.34□□□□□ -2.62
TFF3Q07654 RNA5SP461-201ENST00000516451 104 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AC091163.3-201ENST00000518269 1144 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 DEFB131D-201ENST00000526803 184 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 DEFB131C-201ENST00000528817 165 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AC021231.3-201ENST00000558497 370 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AC068790.2-201ENST00000602601 557 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AL356596.1-201ENST00000624230 379 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 AL603839.4-201ENST00000624658 1005 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 MIR499B-201ENST00000636498 73 ntBASIC-1.34□□□□□ -2.62
TFF3Q07654 SNORD113.3-201ENST00000364630 78 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 AC010153.1-201ENST00000432862 727 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 AL353997.1-201ENST00000432936 108 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 AC069271.1-201ENST00000445577 156 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-1.35□□□□□ -2.63
TFF3Q07654 RNU6-274P-201ENST00000459566 107 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 RNU2-46P-201ENST00000517038 113 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 RNU2-60P-201ENST00000517290 128 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.35□□□□□ -2.63
TFF3Q07654 AL390208.1-201ENST00000605885 644 ntBASIC-1.35□□□□□ -2.63
TFF3Q07654 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
TFF3Q07654 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
TFF3Q07654 MLLT10P1-201ENST00000418346 262 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 ZNF885P-201ENST00000420174 1098 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.36□□□□□ -2.63
TFF3Q07654 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.36□□□□□ -2.63
TFF3Q07654 AC068135.1-201ENST00000446164 246 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 AL133217.1-201ENST00000450980 425 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 FABP5P15-201ENST00000453566 214 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.36□□□□□ -2.63
TFF3Q07654 NAMPTP3-201ENST00000569273 224 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.36□□□□□ -2.63
TFF3Q07654 AL590491.3-201ENST00000610731 82 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 AC092608.3-201ENST00000625017 386 ntBASIC-1.36□□□□□ -2.63
TFF3Q07654 MIR148A-201ENST00000362215 68 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 MIR1185-1-201ENST00000408598 86 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 RNU2-23P-201ENST00000410545 195 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 AL953862.1-201ENST00000423016 168 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 MTND1P33-201ENST00000446251 917 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.37□□□□□ -2.63
TFF3Q07654 AC007215.1-201ENST00000464893 276 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 RN7SKP19-201ENST00000516016 252 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 RNU6-927P-201ENST00000516199 100 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 AC138869.1-201ENST00000568623 124 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 MIR4441-201ENST00000582623 100 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 SNORD39.3-201ENST00000584451 71 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 AC063943.3-201ENST00000615562 356 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 AC022960.3-201ENST00000619794 441 ntBASIC-1.37□□□□□ -2.63
TFF3Q07654 SNORA36.1-201ENST00000363424 132 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 MTCO2P31-201ENST00000402702 684 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 SNORD100-201ENST00000408573 76 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 PSMA6P3-201ENST00000428242 164 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.38□□□□□ -2.63
TFF3Q07654 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
TFF3Q07654 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.38□□□□□ -2.63
TFF3Q07654 AC091885.1-201ENST00000506658 268 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 MTCO3P28-201ENST00000513351 515 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 MTND2P7-201ENST00000521337 640 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.38□□□□□ -2.63
TFF3Q07654 AP002004.2-201ENST00000531656 154 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 AC009268.2-201ENST00000621925 457 ntBASIC-1.38□□□□□ -2.63
TFF3Q07654 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 RNU6-843P-201ENST00000384454 104 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.39□□□□□ -2.63
TFF3Q07654 SNRPEP8-201ENST00000442866 260 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 AC007327.1-201ENST00000447461 264 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 MTND2P33-201ENST00000506452 1031 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 SNORD111.1-201ENST00000516421 86 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
TFF3Q07654 CR383656.4-201ENST00000546909 122 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 AC004217.3-201ENST00000551552 878 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 AC125232.2-201ENST00000592457 143 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.39□□□□□ -2.63
TFF3Q07654 RNU6-811P-201ENST00000384069 107 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 RNA5SP467-201ENST00000391274 118 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 MTCO3P41-201ENST00000414801 328 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 USP9YP21-201ENST00000420603 432 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.4□□□□□ -2.63
TFF3Q07654 AC023824.3-201ENST00000569003 562 ntBASIC-1.4□□□□□ -2.63
TFF3Q07654 AC100830.2-201ENST00000581636 240 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms