Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC126177.8-201ENST00000618339 1015 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.66□□□□□ -2.14
CKAP4Q07065 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CKAP4Q07065 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.66□□□□□ -2.14
CKAP4Q07065 AC073544.1-201ENST00000600110 1595 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 MTND5P9-201ENST00000503854 1755 ntBASIC1.66□□□□□ -2.14
CKAP4Q07065 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CKAP4Q07065 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CKAP4Q07065 Y_RNA.2-201ENST00000362330 96 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 RNU6-1210P-201ENST00000363775 107 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 RNU6-595P-201ENST00000363944 107 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 RNU6-1286P-201ENST00000383871 107 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 Y_RNA.533-201ENST00000384596 114 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 RNU6-331P-201ENST00000384724 107 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 CBX3P9-201ENST00000402326 552 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 RNA5SP450-201ENST00000411206 102 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AC138623.1-201ENST00000418060 216 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.65□□□□□ -2.15
CKAP4Q07065 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.65□□□□□ -2.15
CKAP4Q07065 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.65□□□□□ -2.15
CKAP4Q07065 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.65□□□□□ -2.15
CKAP4Q07065 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
CKAP4Q07065 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.65□□□□□ -2.15
CKAP4Q07065 AC104564.1-201ENST00000493028 407 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 HMGN1P13-201ENST00000505795 138 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 SCARNA16.2-201ENST00000516520 172 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 CBX3P8-201ENST00000532412 525 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 MRPS36P4-201ENST00000534436 298 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 MIR5701-3-201ENST00000578890 82 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 MIR4273-201ENST00000582824 84 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 MIR5701-1-201ENST00000585138 82 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AL078605.1-201ENST00000603529 500 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AC005014.2-201ENST00000607795 599 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AC084781.2-201ENST00000615568 161 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 MIR5701-2-201ENST00000615634 82 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AL160413.1-201ENST00000622780 310 ntBASIC1.65□□□□□ -2.15
CKAP4Q07065 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.64□□□□□ -2.15
CKAP4Q07065 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CKAP4Q07065 ZNF299P-201ENST00000406845 1804 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-212P-201ENST00000362642 104 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 SNORD42.2-201ENST00000365570 69 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-142P-201ENST00000384019 107 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 Y_RNA.419-201ENST00000384041 102 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-968P-201ENST00000384076 107 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-890P-201ENST00000384121 107 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 SNORA29-201ENST00000384183 140 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.64□□□□□ -2.15
CKAP4Q07065 AC009238.1-201ENST00000442165 424 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 UBE2V1P7-201ENST00000446395 340 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC009237.6-201ENST00000446969 424 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RPL30P15-201ENST00000457129 321 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AP001486.1-201ENST00000463339 476 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 HMGB1P35-201ENST00000503360 598 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.64□□□□□ -2.15
CKAP4Q07065 SNORA25.11-201ENST00000515935 105 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 RNU6-307P-201ENST00000516743 106 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 SNORA31.16-201ENST00000516773 139 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.64□□□□□ -2.15
CKAP4Q07065 AC021231.3-201ENST00000558497 370 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.64□□□□□ -2.15
CKAP4Q07065 MIR3136-201ENST00000583498 78 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC133104.2-201ENST00000615272 193 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 AC090574.1-201ENST00000623186 233 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 SCARNA4-201ENST00000629045 128 ntBASIC1.64□□□□□ -2.15
CKAP4Q07065 MTND5P10-201ENST00000603719 1809 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CKAP4Q07065 U3.13-201ENST00000364804 214 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 RNU6-1040P-201ENST00000383974 107 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 SNORA36A-201ENST00000384221 132 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 Y_RNA.504-201ENST00000384481 104 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CKAP4Q07065 Y_RNA.579-201ENST00000390939 94 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC007098.1-201ENST00000420122 367 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.63□□□□□ -2.15
CKAP4Q07065 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.63□□□□□ -2.15
CKAP4Q07065 Y_RNA.639-201ENST00000458981 102 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 SNRPGP7-201ENST00000469016 106 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 RPL30P10-201ENST00000488148 337 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 RPL23AP75-201ENST00000491601 451 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AF186996.7-201ENST00000492781 209 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC093303.1-201ENST00000514549 295 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.63□□□□□ -2.15
CKAP4Q07065 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 SUB1P3-201ENST00000564581 315 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.63□□□□□ -2.15
CKAP4Q07065 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 CYP2C61P-201ENST00000604072 290 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AL034555.1-201ENST00000604816 211 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC022202.1-201ENST00000613515 211 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms