Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.6□□□□□ -2.15
CSTF1Q05048 CYP4A27P-201ENST00000567218 190 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.6□□□□□ -2.15
CSTF1Q05048 AL356157.2-201ENST00000605122 111 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
CSTF1Q05048 AC104458.1-201ENST00000608243 463 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 PCGEM1.1-201ENST00000613431 131 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 AC007014.2-201ENST00000615581 479 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.6□□□□□ -2.15
CSTF1Q05048 MIR1321-201ENST00000637766 79 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 AC024614.3-201ENST00000637860 256 ntBASIC1.6□□□□□ -2.15
CSTF1Q05048 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
CSTF1Q05048 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
CSTF1Q05048 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CSTF1Q05048 CBX3P1-201ENST00000325243 554 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 Y_RNA.89-201ENST00000363031 102 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNY3P3-201ENST00000363816 102 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNU6-1322P-201ENST00000364309 107 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNU6-534P-201ENST00000364877 106 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 SNORD114-22-201ENST00000365423 72 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.59□□□□□ -2.15
CSTF1Q05048 Y_RNA.540-201ENST00000384638 111 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 AL033519.2-201ENST00000403958 392 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 Y_RNA.615-201ENST00000410769 117 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RPL30P16-201ENST00000419341 429 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 NCOR1P3-201ENST00000420479 303 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RPL23AP95-201ENST00000426806 265 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.59□□□□□ -2.15
CSTF1Q05048 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.59□□□□□ -2.15
CSTF1Q05048 MTCYBP18-201ENST00000501056 747 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 AC008628.2-201ENST00000502605 298 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNU6-567P-201ENST00000516746 107 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 RNU6-612P-201ENST00000516909 102 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 MTND1P5-201ENST00000517906 940 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 MTND1P35-201ENST00000526739 508 ntBASIC1.59□□□□□ -2.15
CSTF1Q05048 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
CSTF1Q05048 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.59□□□□□ -2.15
CSTF1Q05048 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CSTF1Q05048 RNU6-1283P-201ENST00000365314 105 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 Y_RNA.390-201ENST00000383932 102 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 MIR181A1-201ENST00000385026 110 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 RNA5SP201-201ENST00000410316 124 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC123900.1-201ENST00000420390 96 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.58□□□□□ -2.16
CSTF1Q05048 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 RNU7-66P-201ENST00000459469 62 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 RNU6-1037P-201ENST00000459571 107 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 RPL9P9-202ENST00000466501 579 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.58□□□□□ -2.16
CSTF1Q05048 Y_RNA.665-201ENST00000516177 98 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 MTND4LP26-201ENST00000518144 282 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 CENPUP1-201ENST00000526649 1202 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 EIF4A1P12-201ENST00000551910 141 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.58□□□□□ -2.16
CSTF1Q05048 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC016925.2-201ENST00000605108 242 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 RNU6-89P-201ENST00000606519 100 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC064836.2-201ENST00000609491 462 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 AC090617.10-201ENST00000624308 134 ntBASIC1.58□□□□□ -2.16
CSTF1Q05048 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.58□□□□□ -2.16
CSTF1Q05048 MIR424-201ENST00000362227 98 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 RNY4P14-201ENST00000363656 96 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 RNU6-1317P-201ENST00000364582 104 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 SNORA32.2-201ENST00000384049 122 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 TIMM9P3-201ENST00000428659 274 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 MRPS10P2-201ENST00000431226 381 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 NFU1P2-201ENST00000448700 469 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC083904.1-201ENST00000487828 231 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC097473.1-201ENST00000508142 408 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 FAM206BP-201ENST00000510179 541 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 SNORA19.2-201ENST00000516013 114 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC087854.1-201ENST00000519706 414 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.57□□□□□ -2.16
CSTF1Q05048 AP005597.4-201ENST00000526762 229 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AL157687.1-201ENST00000554853 619 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 SNORA59B-202ENST00000578183 701 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC136443.5-201ENST00000603741 370 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AP000907.4-201ENST00000604143 237 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.57□□□□□ -2.16
CSTF1Q05048 FER-210ENST00000628534 558 ntTSL 5 BASIC1.57□□□□□ -2.16
CSTF1Q05048 SNORA43.4-201ENST00000629559 138 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 AL450472.1-202ENST00000637286 180 ntBASIC1.57□□□□□ -2.16
CSTF1Q05048 OR4G1P-203ENST00000641984 1631 ntBASIC1.56□□□□□ -2.16
CSTF1Q05048 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
CSTF1Q05048 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CSTF1Q05048 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms